Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0345 ATGGCACCCCACAACATGTCAAAGTGCAGCAACAACCTTCAAAGAACAGTGTCGGACATATCCTACGAGATCTCGAAAGAAGAAGTCCAAGATCTCAAGGCACTGCCGGCAATATCAGAGGTTGAAGACGCCAAGTGTGAGTGCTGTGGGATGAGCGAGGAGTGCACGACGGAGTACATAGAGCGAGTGAGGGACAAGTACTTGGGGAAGTGGGTGTGTGGGCTGTGTGCTGAGGCAGTGAAGGAGGAGCTTGAGAAGAATGGAGGGACGAAAGAGGAAGCCCTAAACGCACACATGAGCGCGTGTGTTAAGTTCAACAAGTATGGTAGGGCTTTTCCTGTTCTGGTTCAAGCTCAGGCCATGAAGGAGATGTTGAAGAAGAGCAATAAGCTTGATGGAAGAAGAGTCAAGTCCTTTAACCCAAGAGACTCCAACAATGATAAGAAAGGAGGCCTTGCAAGGAGTTCAAGCTGCATCCCTCAGCTATGA 489 0.4949 MAPHNMSKCSNNLQRTVSDISYEISKEEVQDLKALPAISEVEDAKCECCGMSEECTTEYIERVRDKYLGKWVCGLCAEAVKEELEKNGGTKEEALNAHMSACVKFNKYGRAFPVLVQAQAMKEMLKKSNKLDGRRVKSFNPRDSNNDKKGGLARSSSCIPQL 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0345 162 MobiDBLite consensus disorder prediction 132 149 - -
Lele38g0345 162 MobiDBLite consensus disorder prediction 132 162 - -
Lele38g0345 162 Pfam Protein of unknown function (DUF1677) 41 127 IPR012876 -
Lele38g0345 162 PANTHER OS01G0745000 PROTEIN 33 161 IPR012876 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0345 Lele-ChrLele38 2800898 2801386 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0915 41 18644887 18654110 Lele38g0345 38 2800898 2801386 CCT
Lele42g0895 42 21701590 21710379 Lele38g0345 38 2800898 2801386 CCT
Lele38g0345 38 2800898 2801386 Lele38g0345 38 2800898 2801386 ECH
Lele38g0345 38 2800898 2801386 Lele39g1059 39 19202897 19203388 hybridization
Lele38g0345 38 2800898 2801386 Lele40g0324 40 2665740 2666225 hybridization