Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0339 ATGAGGAGGAGCACGAGCAAGTCGGGTCAGATAACGGAAGAAGTGGTGAACGTTGGAGGCCATGGATCTCGCCGGACTTCAAACTCCGACGACGACGAGGAGGCGCTGAGATGGGCGGCGATAGAGAAGTTACCAACCTACGACAGGTTAAGAACAAGCATATTACAGAATTTCGTGGAACAAAATGGTCGGCCACGAGGATCGAAGGAAGTTGATGTTCGAAAACTGAATATGAACGAGAGACAACAAATCATCGACAGGATTTTTAAGGTTGCCGAGGAAGATAATGAGAAGTTTCTGAGAAAGTCCAGAGCCAGAATTGATCGGGTAGGGATCACACTTCCAACGGTGGAAGTGAGGTTTGAGAATTTGACCGTTGAGGCAAATGCTTATGTGGGCAAAAGAGCTTTACCAACACTCCCAAACGTGGCCTTGAACATCATCGAATCAGCTTTTGGTTTATGTGGCATTAACATGGCTAAGAGAAGAAAAATCACCATCCTTAATGATGTCTCTGGCATTATTAAACCATCCAGGATGACTCTGTTGTTAGGTCCTCCTTCTTCAGGGAAGACAACCCTTTTGAAAGCATTGGCTCATAAATTAGAACAAGGTTTAAAGGTAAAAGGAGAGATCAATTACAACGGGTACAAGCTGAATGAGTTTGTTCCTAGGAAGACATCAGCCTACATAAGTCAAAACGATGAGCATATTGCAGAAATGACTGTCAGAGAAACTCTGGATTTCTCTTCAAGATGCCAAGGCGTTGGATCTAGATATGATCTTTTAGCTGAGCTTGCCAGGAGAGAAAAGGAAGCAGGCATATATCCAGAGGCAGAAGTTGATCTCTTCATGAAAGCTTCTGCAGTGCCAGAAACAGAAAGCAGTCTCATGACTGACTACACTCTCAAAATATTGGGGTTGGATATATGCAAAGACACGATAGTGGGGGATGCGATGAGAAGAGGCATTTCAGGAGGACAAAGGAAGAGGGTGACGACAGGGGAGATGATAGTGGGGCCCACAAAGACACTGTTGATGGACGAGATATCGACGGGTCTTGACAGCTCCACCACGCACCAGATAGTGAAATGCTTGCAGCAGATTTGTCACCTTACAGAAGCCACCATCTTCATGTCCCTCCTTCAACCTGCTCCTGAAACCTTCGACCTCTTCGACGATGTTGTCCTCATGTGCGAGGGCCGCATCGTTTACCAAGGCCCACGTCACCACATCCTTGACTTCTTCGAATACTGCGGCTTCCGTTGCCCTGAACGAAAGGGAACCGCCGATTTCTTAGTCGAGGTAAATTCAAGAAAAGACCAAGAACAATATTGGGCAGACAGAAGCAAGCCATACAGGTACATGACAGTTGCAGAGTTTGTGAACAGATTCAAGGAATTTCATGCCGGGGTTGAGCTCAAGAAAGATCTTTCAGTGCCATTCAATAAGTCAAAGGGACACAGAGCAGCATTGGTTTTTGAGAAACATTCAGTTGACAAAATGCAACTTCTGAAAGCGTGTTGGGGAAAAGAATGGTTACTCTTAAGAAGAAACTCCTTCGTCTACATATTCAAGTCATGTCAGATTATCATTCTAGCTTTTATAACTGCGACGGTGTTCTTCAGGACGACAATGCACCAGAATGACGAGAATGATGGGGCAGTTTATGTTGGGGCCATTATGTTCTCCATGCTCAATAACATGTTCAGTGGTTTTGGAGAACTTGGTCTTATCATGCAAAGGCTTCCTGTGTTTTATAGGCAACGTGACATGCTTTTTCATCCTGTTTGGGCTTACACTCTTCCCAATTTTCTGCTTGCTTTCCCTAGAATGGTGTTGGAGACGATTATTTGGGTCGCTATTACCTATTACACTGTAGGCTATGCACCTGAAGTTAGCAGGTTCTTTAAGCAAATGTTGTTGCTATTTCTTACTCAAATAATGGCATCTGGGTTGTACAAGACAATTGCTGCAGTCTGTAGGTCGGTGATTATTGCTAATACAGGGGGATCTCTCATGATTCTTCTCATTTTCCTACTTGCTGGTTTCATCGTTCCCAAAAATGAGATTCCAAGTTGGTGGTCGTGGTCTATGTGGATTTCACCAATGTCATATTCCTATATTGGCCTTATTTTGAATGAAATGACCGCTCCAAGGTGGATGAACAAAAGGTCTTCAGATGGTTCCACTTCATTAGGTCTAGCCATACTAAAAGCCACTGGTATATACCCTGAAGCGAAATGGTATTGGATTTCTGCAGCAGCTATTGTGGGATTAGCAGTTGTGTACCATATTCTCTTCACCCTTGCACTTATGTACCTAAACCCTCTTGGAGGAAAACAAGCTACTATATCTGAAGAGGAAGCAAGTGAAGTGGAGACTAATATGAACAAAAGACAAGTGCAAATGCAGCAGTTGAGTAGCAGAATTAATACTAATAACTCAGCACAAGAGTCAACCACTGGAGTTGGCCCCAACAGAGGAATGGTTCTACCTTTCACACCACTTGCAATGTCCTTTGATAGTGTTAATTACTATGTTGATATGCCAAATGAAATGAAAGAGCAAGGATTGACAGATGATAGGCTACAACTACTTAAGGACGTCACTGGAGCTTTTAGGCCTGGTGTTCTGACTGCTTTAATGGGAGTCAGTGGAGCAGGAAAGACAACCTTAATGGATGTTTTAGCAGGAAGGAAGACCGGTGGCTACATCGAAGGTGATATCAGAATCTCCGGGTTCCCTAAGAAGCAAGAAAGCTTTGCAAGAATTTCTGGTTATTGCGAACAAACTGATATCCACTCACCTCAAGTTACTGTTTATGAATCTTTGATATTCTCTGCTTTCCTCCGCATATCTAAAGAAGTCAGTCAGAAAGAAAAGAAGAAATTTGTGGAAGAAGTAATGGATTTGGTGGAGCTGAACAATCTCAAGGATGCTATAGTAGGGATTCCAGGTGTTACAGGGTTATCAACAGAGCAAAGAAAGAGACTAACAATTGCAGTTGAACTTGTTGCTAATCCTTCAATCATTTTCATGGATGAGCCAACTTCAGGTTTAGATGCAAGAGCAGCCGCCATTGTAATGAGAACTGTGAGAAATACGGTTGACACTGGAAGAACAGTTGTTTGCACAATTCACCAACCTAGTATTGATATCTTTGAAGCCTTTGATGAGCTCTTGCTGATGAAAAGAGGAGGGCAAGTGACCTACTCAGGACCACTAGGTCGTCATTCTCAAAAAATCATAGAATTCTTTGAGGCAATTGAAGGTGTCTCAAAAATCAGGGATAAGTACAATCCAGCCGCGTGGATGCTAGAAGTAACTTCAATTTCTGCAGAAGTTCGACTTGGAATTGATTTTGCTGAACACTACAAGTCATCATCTTTGTACCAGAGAAACAAGGAACTTGTGAAGGAGTTAAGCATACCACCAGAAGGGGCAAACGATCTCTACTTTGAGAGTCAGTATTCAGAATCAACATGGGGGCAATTCAAATACTGTTTGTGGAAGAAATGGTGGAGTTACTGGAGAAATCCAGATTATAACCTTGTCAGATTCTTCTTCACTTTCATAACTGGCCTCCTCATGGGGACAATATTTTGGGGCTTTGGAAAAAGAAGGAAAAGCTGGACTGATTTCAGAACTGTTATAGGAGCCATGTTTTCTGCTGTCCAATTTGTTGGAGTAAACAACTGCTCAACTATTCAACCGGTAATAGGCGTTGAGAGAACAGTATTTTATCGCGAGAAGGCTGCTGGAATGTACGCCGGCTTGCCTTATGCCATCGCGCAGGTTGTGATTGAAATACCGTATGTACTTGTTCAATGTACATATTACTCGATCATAGTATATTCTATGATTGGATTTCAATGGACTGCAGCAAAGTTCTTCTGGTTCTACTTCATCTGCTTCTTCTCCTTCTTGTACTTCACATATTATGGCATGATGTCTGTAGCCATCACTCCCACCACCCAACTTGCTGCAATTTTCTCATCAGCATTCTATGGACTCTTCAATATCTTCTCTGGTTTTATGATCCCAAGACCAAGGATTCCTAAGTGGTGGTCTTGGTATTGCTGGATTTGCCCAGTGTCATGGACAATTTATGGATTGATTGTGTCACAATATGGTGATGTAGAAGACAGAATTGAAGTTCCTGGGATTGAACATGGTCAACCAATCAAAGAGTTTATTCAAAGCTATTTTGGGTATGATCCTAACTACATGGGACCTATTGCTGCAATTTTGGTCGGCTTTGCTGTCTTCTTTGCTTTCATGTTTGCTTTGGGCCTTCAGTTCTTAAATTTCCAGACCAGATAG 4326 0.4265 MRRSTSKSGQITEEVVNVGGHGSRRTSNSDDDEEALRWAAIEKLPTYDRLRTSILQNFVEQNGRPRGSKEVDVRKLNMNERQQIIDRIFKVAEEDNEKFLRKSRARIDRVGITLPTVEVRFENLTVEANAYVGKRALPTLPNVALNIIESAFGLCGINMAKRRKITILNDVSGIIKPSRMTLLLGPPSSGKTTLLKALAHKLEQGLKVKGEINYNGYKLNEFVPRKTSAYISQNDEHIAEMTVRETLDFSSRCQGVGSRYDLLAELARREKEAGIYPEAEVDLFMKASAVPETESSLMTDYTLKILGLDICKDTIVGDAMRRGISGGQRKRVTTGEMIVGPTKTLLMDEISTGLDSSTTHQIVKCLQQICHLTEATIFMSLLQPAPETFDLFDDVVLMCEGRIVYQGPRHHILDFFEYCGFRCPERKGTADFLVEVNSRKDQEQYWADRSKPYRYMTVAEFVNRFKEFHAGVELKKDLSVPFNKSKGHRAALVFEKHSVDKMQLLKACWGKEWLLLRRNSFVYIFKSCQIIILAFITATVFFRTTMHQNDENDGAVYVGAIMFSMLNNMFSGFGELGLIMQRLPVFYRQRDMLFHPVWAYTLPNFLLAFPRMVLETIIWVAITYYTVGYAPEVSRFFKQMLLLFLTQIMASGLYKTIAAVCRSVIIANTGGSLMILLIFLLAGFIVPKNEIPSWWSWSMWISPMSYSYIGLILNEMTAPRWMNKRSSDGSTSLGLAILKATGIYPEAKWYWISAAAIVGLAVVYHILFTLALMYLNPLGGKQATISEEEASEVETNMNKRQVQMQQLSSRINTNNSAQESTTGVGPNRGMVLPFTPLAMSFDSVNYYVDMPNEMKEQGLTDDRLQLLKDVTGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQESFARISGYCEQTDIHSPQVTVYESLIFSAFLRISKEVSQKEKKKFVEEVMDLVELNNLKDAIVGIPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLMKRGGQVTYSGPLGRHSQKIIEFFEAIEGVSKIRDKYNPAAWMLEVTSISAEVRLGIDFAEHYKSSSLYQRNKELVKELSIPPEGANDLYFESQYSESTWGQFKYCLWKKWWSYWRNPDYNLVRFFFTFITGLLMGTIFWGFGKRRKSWTDFRTVIGAMFSAVQFVGVNNCSTIQPVIGVERTVFYREKAAGMYAGLPYAIAQVVIEIPYVLVQCTYYSIIVYSMIGFQWTAAKFFWFYFICFFSFLYFTYYGMMSVAITPTTQLAAIFSSAFYGLFNIFSGFMIPRPRIPKWWSWYCWICPVSWTIYGLIVSQYGDVEDRIEVPGIEHGQPIKEFIQSYFGYDPNYMGPIAAILVGFAVFFAFMFALGLQFLNFQTR 1441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0339 1441 Pfam Plant PDR ABC transporter associated 721 785 IPR013581 -
Lele38g0339 1441 Pfam ABC-transporter N-terminal 83 143 IPR029481 -
Lele38g0339 1441 MobiDBLite consensus disorder prediction 1 33 - -
Lele38g0339 1441 Pfam ABC transporter 867 1019 IPR003439 GO:0005524
Lele38g0339 1441 Pfam ABC transporter 168 350 IPR003439 GO:0005524
Lele38g0339 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 152 425 IPR003439 GO:0005524
Lele38g0339 1441 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 17 1441 - -
Lele38g0339 1441 Pfam ABC-2 type transporter 1165 1378 IPR013525 GO:0016020|GO:0140359
Lele38g0339 1441 Pfam ABC-2 type transporter 504 715 IPR013525 GO:0016020|GO:0140359
Lele38g0339 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 163 425 IPR027417 -
Lele38g0339 1441 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 862 1075 IPR027417 -
Lele38g0339 1441 SMART AAA_5 876 1068 IPR003593 -
Lele38g0339 1441 SMART AAA_5 177 402 IPR003593 -
Lele38g0339 1441 FunFam ABC transporter G family member 40 853 1083 - -
Lele38g0339 1441 Gene3D - 854 1088 IPR027417 -
Lele38g0339 1441 Gene3D - 156 418 IPR027417 -
Lele38g0339 1441 FunFam ABC transporter G family member 34 155 459 - -
Lele38g0339 1441 CDD ABCG_PDR_domain2 836 1074 IPR034003 -
Lele38g0339 1441 Pfam ABC-2 type transporter 383 459 IPR043926 GO:0140359
Lele38g0339 1441 Pfam ABC-2 type transporter 1048 1109 IPR043926 GO:0140359
Lele38g0339 1441 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 848 1091 IPR003439 GO:0005524
Lele38g0339 1441 CDD ABCG_PDR_domain1 161 407 IPR034001 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0339 Lele-ChrLele38 2734000 2744118 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0339 864 1051 Calmodulin-binding Proteins AT2G36910 25.871 8.32e-06 48.9