Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0329 ATGGCTGTGGAATTCAGATGCAACTGGGCTTGGCTCTCGTTGTTATGGTTTGTCTCTGTAACAGTATCTGCTATTCAGGAAGTTGATGGGATATCCATAGTTCTGGCTGCAGAGAAGAACTCTGCAAATATCAAACAGGCCAGAAGGAAATTGGATGATGTGGGTGGCTCTATTGACATTGATTGTGGCCTACTTAATGAGCATGGCTATACTGACAGCAAAACTGAGATACCCTACACTACAGATTCGAAATTCATCGATACTGGAAAAAACCGGGACATATTGATTGAGTTCAATTCCAAAAGGCTTGAAGGAATATTTAGAAATGTAAGAAGCTTTGCTGAGGGTAAGAGGAATTGTTACACTCTAAGACATCCAGAAGGTAGAAATACTGTTTACTTGTTGAGAGCTTCTTTCATGTATGGCAACTATGATGGTCTGAATCAGCCTCCCAAGTTTGGTCTTTATATTGGAGTTAATTTGTGGGACACTGTAAATTTCGACAACGCCTCGCATATTGTAATAAAGGAGATTTTACATGTGCCACCTATGGATTTTGTACATATTTGCTTACTGAACACCAATGAAGGAACTCCTTTTATATCAGCACTGGAAATGAGGCATCTTCACAGTTCCATTTATAACAAATCTCGAACCTTAGCTCTCTATAAACGTCTTGACTTTGGTTCAACAACCAATGAAATAGTGAGGTTTAAAGAAGATTCCTATGATAGGATTTGGTATCCTTACAATTTATCTAATTGTGAGCCATTGAGTACTAACTTGACCATTAATTCCTTCAACAATGCATATCGGCTACCATCAACAGTAATGAGAACTGCTGTAACACCAACTAATAGTAACGAAACCCTCGAAGTTCGGTTTGACACTGGTGATGCTATTTCAAAGTTCTATGTTTTTATGCACTTTGCTGAGATTAAGGAGCTCCAGGAAAATGAGCACAGAGAATTCAACGTTACATTGAATGGGAAATTGTTGGATGAGTCTGTAGATTATGTAGTCCTTAAATATTTAGAAGCTACCACAATTCATAATCCACAGCCCATCACAGGACCCAACCTTTGGTTCACTTTGAACAGGGAAAAAAATTCCACCCTCCCTCCAATTCTCAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGACCAAGAAGATGTTAATGCTATCATGGACATCAAAGAAGCCTACACTATTAAGTCATGGCAAGGAGATCCTTGTGCCCCAATGTATTCCTCCTGGGATGGACTTAACTGCAGTTACAATGGATATAATGCACCTAGAATAATTGAATTAAATCTATCCTCCAGCAACTTGTCAGGAACAATAAGTCAATCATTTTCCATGCTTAAATCTTTAGAATATTTGGATTTATCAAACAACAGATTAACTGGATCACTGCCTGATTTTTTCATTCATTTGCCACGCTTGAAGACTCTAAATTTATCAGGAAACAGGCTCTCTGGTGAAATTTCATCACCTCTCAGGGAAAGATCAAGTAATGGGTCACTTTTGTTGAGTGTAGAAGGAAATCCTGATCTTTGCCAGAATCCTCCATGCAAAGAGGACAATAGTACTTTTCCACTTCATGCAGTCATAGCCATTATTTCATCCGTAGTCTTTTTAATTGTACTGGGTATTTTAGTCTGCATTATCTGGAGAAAGAAATTCAGCAAAAAACCAGCAAATCAGCCGGTGACATCGCGTGAGGAAGTTGTGCTGAAGTCAAGCAATACGCAATTCACGTACTCCCAGATAATAGATATTACCAATAACTTCGAGAAAATGATTGGAAAAGGAGGATCTGGAACTGTTTATCATGGCTCCTTATTTGATGACACACAAGTTGCTGTCAAACTGCTCTCATCGTCAGAAAGCTCTACGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGAGTTCATCATAGAAACTTAGCTTCCTTCCTTGGATATTGTAATGAAGGCGAACACACTGCAATCATTTATGAGTTCATGGCTTATGGGAACTTAGAGAAGTGTCTTTCAGGTTCAATGAAAGAATTATCAAGTTGGAAAAATAGGATTCAGATAGCAGTCGATGCCGCTCAAGGACTTGAATATTTGCATCATGGCTGCAAGCCTCCTATAGTTCACAGGGACATAAAGACATCAAACATTTTGCTGAATGAGAAAATGCAAGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTCCTTTTCAACAGAAAGCGAAAGCCATATATCAACGGGAGTCGTTGGTACATTCGGGTACCTTGACCCAGAATACTACTCATTCAACAGGCTTACCGAGAAAAGTGATGTTTATAGTTTTGGCATTGTGCTTTTGGAGCTTATTACAGGGCAGAGAGCAATAATTAAAGGTCAAGAGAACACTCACATTGTGAATTGGGTTACCCCTTTTGTGAAAAGAGGAGATCTGCAACAAATTTTGGATCCAAGGTTGCAGGGAGATTTTGATTTTGGTTCTATGTGGAAGGCTGTGGAAGCAGCAATAGCTTGTGTATCTCCAACCTCCATCCAAAGACCATCAATGAGTTATATTGTCCCAGAATTAAAAGAAAGCTTAGAAATGGAAACAGCTCGTCAACAAAAGTGGGCTACAGATGGAAAAATGCTGAAATCAAACAGCTCATTCCACAGTCATGTTGATCTTGAAGCTGCCTCTGGTCCAGAAGCAAGATAG 2733 0.3919 MAVEFRCNWAWLSLLWFVSVTVSAIQEVDGISIVLAAEKNSANIKQARRKLDDVGGSIDIDCGLLNEHGYTDSKTEIPYTTDSKFIDTGKNRDILIEFNSKRLEGIFRNVRSFAEGKRNCYTLRHPEGRNTVYLLRASFMYGNYDGLNQPPKFGLYIGVNLWDTVNFDNASHIVIKEILHVPPMDFVHICLLNTNEGTPFISALEMRHLHSSIYNKSRTLALYKRLDFGSTTNEIVRFKEDSYDRIWYPYNLSNCEPLSTNLTINSFNNAYRLPSTVMRTAVTPTNSNETLEVRFDTGDAISKFYVFMHFAEIKELQENEHREFNVTLNGKLLDESVDYVVLKYLEATTIHNPQPITGPNLWFTLNREKNSTLPPILNAMEIYFEKDSYQEPTDQEDVNAIMDIKEAYTIKSWQGDPCAPMYSSWDGLNCSYNGYNAPRIIELNLSSSNLSGTISQSFSMLKSLEYLDLSNNRLTGSLPDFFIHLPRLKTLNLSGNRLSGEISSPLRERSSNGSLLLSVEGNPDLCQNPPCKEDNSTFPLHAVIAIISSVVFLIVLGILVCIIWRKKFSKKPANQPVTSREEVVLKSSNTQFTYSQIIDITNNFEKMIGKGGSGTVYHGSLFDDTQVAVKLLSSSESSTQFQTEAELLMRVHHRNLASFLGYCNEGEHTAIIYEFMAYGNLEKCLSGSMKELSSWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDIKTSNILLNEKMQAKVADFGFSKSFSTESESHISTGVVGTFGYLDPEYYSFNRLTEKSDVYSFGIVLLELITGQRAIIKGQENTHIVNWVTPFVKRGDLQQILDPRLQGDFDFGSMWKAVEAAIACVSPTSIQRPSMSYIVPELKESLEMETARQQKWATDGKMLKSNSSFHSHVDLEAASGPEAR 910
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0329 910 SMART LRR_typ_2 485 513 IPR003591 -
Lele38g0329 910 SMART LRR_typ_2 461 484 IPR003591 -
Lele38g0329 910 SUPERFAMILY Protein kinase-like (PK-like) 580 866 IPR011009 -
Lele38g0329 910 SUPERFAMILY L domain-like 412 506 - -
Lele38g0329 910 Gene3D Transferase(Phosphotransferase) domain 1 676 895 - -
Lele38g0329 910 Gene3D Phosphorylase Kinase; domain 1 566 675 - -
Lele38g0329 910 Pfam Protein tyrosine and serine/threonine kinase 604 814 IPR001245 GO:0004672|GO:0006468
Lele38g0329 910 Gene3D Ribonuclease Inhibitor 397 525 IPR032675 -
Lele38g0329 910 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 676 881 - -
Lele38g0329 910 Pfam Malectin-like domain 60 383 IPR024788 -
Lele38g0329 910 ProSitePatterns Protein kinases ATP-binding region signature. 608 630 IPR017441 GO:0005524
Lele38g0329 910 PANTHER OS07G0107800 PROTEIN-RELATED 58 872 - -
Lele38g0329 910 ProSitePatterns Serine/Threonine protein kinases active-site signature. 720 732 IPR008271 GO:0004672|GO:0006468
Lele38g0329 910 ProSiteProfiles Leucine-rich repeat profile. 463 485 IPR001611 GO:0005515
Lele38g0329 910 ProSiteProfiles Protein kinase domain profile. 602 910 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0329 910 PRINTS Leucine-rich repeat signature 464 477 - -
Lele38g0329 910 PRINTS Leucine-rich repeat signature 485 498 - -
Lele38g0329 910 CDD STKc_IRAK 608 870 - -
Lele38g0329 910 FunFam Leucine-rich repeat receptor-like kinase 396 528 - -
Lele38g0329 910 SMART serkin_6 602 869 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0329 910 Pfam Leucine rich repeat 442 498 IPR001611 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0329 Lele-ChrLele38 2610172 2615876 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0329 50 877 Receptor kinase-like Gene Family AT2G19210 46.603 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Lele38g0329 Malectin_like 1e-106 CL0202