Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0318 ATGGCCACAGTACCAGGGCAGCTCGTGTGGGAAATCGTGAAGAAGAACAACTGTTTTTTGGTGAAGGAGTTTGGTAGGGGTACTCAGAGCGTGCAGTTCAGTAAAGAGAGCAACAATCTCTACAACCTTAACTCTTTCAAGTTCTCTGGCTTGGCAAACAAGAAAACCATTACTATTCAGCCTGCTGGCAAGGATCAATCTGTGCTGCTGGCAACGACCAAGACGAAGAAGCAGAACAAGCCGGCTGCATTGCTTCATAAGTCTGTCATGAAAAAGGAGTTCAGAATGATGGCAAAGGCAGTAGAGAACCAGGTTGGAGATAACTACTACAGGCCTGATCTTAAGGAGGCAGCCCTTGCGAGGTTGAGCGCCATTCATAGGAGCCTCAAAGTTGCCAAGTCTGGTGTTAAAAAGAGGAACAGACAGGCTGTGAGGATTGCTGCAGCCATGTCGGTAAAGAAATCTGCCTCTATGAACGGCGGAGACAAGGCCGCCGGAGCAGTTGAAAAAGCCAGGAAACGACGACGTTTCAACCGGTGGTTCTCGTTCGTGGAAGTATCTCTGGAGCCAGGGAAGCAGCTGAAGGACATGGATTCCAACAAGCTTAAGAATGAGATCAGGAGGTGGGCTAAGGCTGTTGTGGCCTATGCCCGCCAAGTCAGCGGCCGGTTTGGAAGCTCCGGTGGAAAATCTCAGAGATAA 702 0.4972 MATVPGQLVWEIVKKNNCFLVKEFGRGTQSVQFSKESNNLYNLNSFKFSGLANKKTITIQPAGKDQSVLLATTKTKKQNKPAALLHKSVMKKEFRMMAKAVENQVGDNYYRPDLKEAALARLSAIHRSLKVAKSGVKKRNRQAVRIAAAMSVKKSASMNGGDKAAGAVEKARKRRRFNRWFSFVEVSLEPGKQLKDMDSNKLKNEIRRWAKAVVAYARQVSGRFGSSGGKSQR 233
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0318 233 FunFam 60S ribosomal protein L28 5 133 - -
Lele38g0318 233 PANTHER 60S RIBOSOMAL PROTEIN L28 1 146 IPR002672 GO:0003735|GO:0005840|GO:0006412
Lele38g0318 233 Gene3D - 6 134 - -
Lele38g0318 233 Pfam Ribosomal L28e protein family 8 128 IPR029004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0318 Lele-ChrLele38 2522077 2525424 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0318 1 143 Cytoplasmic Ribosomal Protein Gene Family AT4G29410 74.825 5.94e-76 224
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0318 38 2522077 2525424 Lele40g0297 40 2411949 2415198 hybridization