Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0315 ATGCAAGACCCAACGATGTTCCAGCCGATGAAACCCCAATTTACTGAACAAGAACAGCTTAAATGTCCGCGTTGTGATTCTACTAACACCAAATTCTGCTACTACAACAACTATAATCTCTCCCAGCCACGCCATTTTTGCAAGAATTGCAGAAGGTATTGGACCAAAGGCGGTACTCTTCGAAACATACCAGTCGGTGGTGGAAGCAGGAAGAACACGAAACGATCGTCAACCACCAAACGCCCTTCTGCTGCTACTTCTTCAACATCATCTCCTCCTGCATCGGCTTCACCTGCCTCCACAGCTCGTCTGGATCCTGACCCGGCCCGGTTTTTTGCCAACCAGAGTGGTCCCATGAACATTGGTGGGAGTTTCAGTTCCCTTCTGGCGTCAACTGTGCAGTGGGGAGGTTTATTGGAAGGTCTGAATTCAAATGGGCCTGGTTTGAGAATGATGCAACTGAATGAATTTGGGGAGAATGTGGGTTCTGCCCATGTGAAGAATTCGGATTCGGGTCGAAACCCAGGGCTGGAAAGGCAGAGCAATGGTAATTCGGAGAGCTTTCTGGGTAAGCAAAATGTTGATTCAAGCTGTTGGAATGGTGGTAGCAATGGGTGGTCTGATCTTGCAATATATACACCAGGCTCAAGCTATCAGGTTAAGAAGATGATAGAGAGGCTAAAATTCTTGGAGACCCATTTTTTTCTTCTAAATTTGAATTTGGAATTGGGGATTGGTTTGGTGGTTGAGGTGGTGGGATTGATAGAAATTCAAGTGGATGCCATTTTTGCCCATGAGTTCATCAAGCCCTCTCGCTCTCATCTTCCCAATTTTGAAGAAGAAAGACAATCCCAGAATAATCAATCAGTCACTTGCACTCAGCAACAATCACCTTCAAATAAAGTTTACCCCTTTGTCATATCCTTCTTGTATAGTCTCACTCAAGTATCTTCTCATCAGAGAACCTTCACTCAACTTGAGCCCCAAGATCTCACTGAAAATTTTGTCGCCCAGTCTGCAGACTCGCTAATAAAATCAACGGAACCAAATTCGGGGAGGATAGAATACGCAAGGGAAGGAGTCTGA 1086 0.453 MQDPTMFQPMKPQFTEQEQLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGTLRNIPVGGGSRKNTKRSSTTKRPSAATSSTSSPPASASPASTARLDPDPARFFANQSGPMNIGGSFSSLLASTVQWGGLLEGLNSNGPGLRMMQLNEFGENVGSAHVKNSDSGRNPGLERQSNGNSESFLGKQNVDSSCWNGGSNGWSDLAIYTPGSSYQVKKMIERLKFLETHFFLLNLNLELGIGLVVEVVGLIEIQVDAIFAHEFIKPSRSHLPNFEEERQSQNNQSVTCTQQQSPSNKVYPFVISFLYSLTQVSSHQRTFTQLEPQDLTENFVAQSADSLIKSTEPNSGRIEYAREGV 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0315 361 MobiDBLite consensus disorder prediction 69 98 - -
Lele38g0315 361 MobiDBLite consensus disorder prediction 61 115 - -
Lele38g0315 361 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Lele38g0315 361 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Lele38g0315 361 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 15 166 IPR045174 GO:0003700|GO:0006355
Lele38g0315 361 MobiDBLite consensus disorder prediction 162 187 - -
Lele38g0315 361 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0315 Lele-ChrLele38 2492624 2498511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0315 11 139 C2C2-Dof Transcription Factor Family AT1G51700 56.296 1.67e-44 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Lele38g0315 zf-Dof 4.7e-33 No_clan