Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0310 ATGGCTAGCGTCGCGCCTTCCGCGTCTTCTTCACACTCCTTGTTCGCGGCTCGCGAACCGGGACGAACTGTTATCTCTTTCATCTGTGAAATTCATCGATGGGGCTTCTTGGGGGTAAAACTTGAAGATAACTTCCATTTCCCCAGAGAGCTAAACAAAATGGCCTCCACTTTCAGTCTTACTAGTGTTGATTTGACACATTTTGCTTGCGTTTGGGGATTATTGGTGCTCATGAATCGAGAACAGAAGCGAGGGAAGCAAGAAAAAGAGTCTGATGGTGCTGAGGTGGTCATTGTTGCCGTCAAGGCATCGAAGGAAATACCTAAGACTGCTCTTGTCTGGTCTCTAACTCATGTCGTTCAACCTGGGGATTGCATTATTTTGTTAGTGGTTTTGCCTCCACAAAGCTCAGGTAGAAGATTGTGGGTGTTTCCTAGATTTGCTGGTGACTGCGCCAGCGGTAGCAAGAAGTCTCCTCCTTCCGGAACAACTTCAGAGAAGAAGTGTGAGATCAATGATTCTTGTTCCCAGCTGATCCTTCGGCTTCATGATGTCTATGATCCAAATAAGATAAATGTCAAGATTCAAACTGTATCTGGATCTCCTTGTGGAGGAGTAGCTGCAGAGGCCAAAAAAGTTCAGGCCAGTTGGGTTGTCTTAGACAAAGATCTCAAACATGAAGAAAAACGCTGCATGGAAGAATTGCAATGTAACATTGTAGCTATGAAGCGTTCTCAACCAAAAGTTCTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCCTGAAGAAGCCAGCCCATTACCTTCTGTGAAAGAAACACCAGGAAAACAAGCCAAACAGAAGAACGAATCTTTAAACTCCATAAAAGCACCTGTTGTAACCCCAACTAGCAGCCCGGAGCAAGAGACACCATTTACTGCGACTGAAGCTGGTACCTCATCAGTTTCGAGCTCAGATCCTGGGACCTCACCATTTTTTGTCTCAGATATCAATGGTGAGTTAAAGAGAGAGGAGACAATTAAGGAAAATGAAGAACTTGATGATACTAATTCGGACACAGACAGTGAAAATATGTCCACATCTTCAGCAAGCATGAGATTCCAGCCTTGGATCTCTGAAATGCTTCTACATCAACGATCATCTCAACGTGCAGAAGAAAGATGTGAGAGATCTCATAATAAGCCCCAAACATCTACAACCAGAACCTTGCTTGAAAAGCTCTCAAGGCTCGAGAGAGATTCCGGATTTGAAATTTCAACCTATAGAAGTGACTTGGATTTCAGTGGAAATGTAAGAGATGCAATAGCATTATCTAGAAATGCTCCCCCTGGTCCACCTCCGTTATGTTCAATATGTCAACATAAAGCACCGGTTTTTGGAAAACCTCCAAGGTGGTTTAGCTATGCTGAGTTGGAGCTTGCTACCGGGGGATTTTCACAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTATCAGATGGGCAAGTCATTGCTGTCAAGCAACATAAATTGGCAAGTTCTCAGGGTGATCATGAGTTTTGCTCAGAAGTAGAAGTCTTAAGCTGTGCTCAGCATCGGAATGTTGTTATGCTGATTGGGTTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAGTATATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACAACGGGATGTATTAGAGTGGTCTGCACGGCAAAAGATTGCTGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAGTGCAGAGTGGGTTGCATTATCCACCGGGACATGCGCCCAAACAATATTCTAATCACTCATGATTTTGAACCATTGGTTGGTGATTTTGGACTGGCAAGGTGGCAACCTGATGGAGACACTGAAGTGGAAACTAGAGTCATCGGAACCTTTGGGTATTTGGCTCCAGAATATGCTCAAAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCCTTTGGGGTGGTATTAGTGGAGCTTGTTACTGGGAGAAAAGCTGTGGATCTCAATCGACCTAAAGGGCAGCAGTGTCTTACTGAATGGGCGCGACCACTGTTAGAGGAATATGCCATCGAGGAACTGATTGATCCAAGGCTGGGAAATTGCTATTCGGAAAATGAGGTCTATTGCATGCTCCATGCAGCCTCATTATGCATACGGCGAGATCCTCATTCTAGACCTCGCATGTCACAGGTTCTCCGAATGCTTGAGGGCGACATGGTCATGGAGGCAAATTACCTAGCAACTGCTGGTTATGATGCTGGTAACCGGAGTGGTCGGATCTGGGCAGAGCAGCAGATGCAGCATCATTATAGTGGTCCCCTGCTGGATGAGGCCCTGGAATCATCATTCAGTGGTAAGCTTTCTCTGGAGAAATACAGGTCTGCCTACTGGGAAAGGGACAAAGCCTAA 2451 0.4512 MASVAPSASSSHSLFAAREPGRTVISFICEIHRWGFLGVKLEDNFHFPRELNKMASTFSLTSVDLTHFACVWGLLVLMNREQKRGKQEKESDGAEVVIVAVKASKEIPKTALVWSLTHVVQPGDCIILLVVLPPQSSGRRLWVFPRFAGDCASGSKKSPPSGTTSEKKCEINDSCSQLILRLHDVYDPNKINVKIQTVSGSPCGGVAAEAKKVQASWVVLDKDLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDPEEASPLPSVKETPGKQAKQKNESLNSIKAPVVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVSDINGELKREETIKENEELDDTNSDTDSENMSTSSASMRFQPWISEMLLHQRSSQRAEERCERSHNKPQTSTTRTLLEKLSRLERDSGFEISTYRSDLDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRDVLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTEVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWARPLLEEYAIEELIDPRLGNCYSENEVYCMLHAASLCIRRDPHSRPRMSQVLRMLEGDMVMEANYLATAGYDAGNRSGRIWAEQQMQHHYSGPLLDEALESSFSGKLSLEKYRSAYWERDKA 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0310 816 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 555 758 - -
Lele38g0310 816 Gene3D Phosphorylase Kinase; domain 1 451 554 - -
Lele38g0310 816 MobiDBLite consensus disorder prediction 280 326 - -
Lele38g0310 816 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 451 554 - -
Lele38g0310 816 SUPERFAMILY Protein kinase-like (PK-like) 463 755 IPR011009 -
Lele38g0310 816 Pfam Protein kinase domain 483 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0310 816 Gene3D Transferase(Phosphotransferase) domain 1 555 762 - -
Lele38g0310 816 ProSitePatterns Tyrosine protein kinases specific active-site signature. 600 612 IPR008266 GO:0004672|GO:0006468
Lele38g0310 816 MobiDBLite consensus disorder prediction 380 395 - -
Lele38g0310 816 FunFam Dual-specific kinase DSK1-like 88 243 - -
Lele38g0310 816 MobiDBLite consensus disorder prediction 256 363 - -
Lele38g0310 816 PANTHER OS01G0750732 PROTEIN 319 762 - -
Lele38g0310 816 MobiDBLite consensus disorder prediction 379 402 - -
Lele38g0310 816 ProSiteProfiles Protein kinase domain profile. 479 755 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0310 816 CDD STKc_IRAK 485 751 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0310 Lele-ChrLele38 2428625 2436368 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0310 459 807 Trihelix Transcription Factor Family AT1G70460 48.468 2.56e-104 335
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Lele38g0310 Pkinase 9.7e-42 CL0016