Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele38g0309 | ATGGAGACAAAACTTGAGCTTCTCCATGGAACAATTGAAGCCACCATCTTCAATGCTACTCCTTGTGCACCAGCATTTCCCTTCAATTGTATCCGTGCAAATGGTAAACCTGCATATGTGACCATCAAGCTAGGCAACAAGAAGGTAGCCAAGACAAGTGAAGAACGAGATCGTGTGTGGAATCAAACCTTTCAGATCCAGTGTGCTCAACCAGAAGATTCAATTGTCATCCTCACATTGAAAATATCATGCTCCGTATTGGGGAGATTTCATATTCAGGCCCAGAAGTTACTGAAGGAGGAAAGTTTAATCAATGGTTTCTTCCCCCTCCAAATGGAAAATGGAAAACCAAATCCTCAACTCAAGTTAAGGTTTCTATTGTGGTTCAAACCAGCAGGGCTTGAACCAAGTTGGGAAAAGCTACCAAGGGATGGGGAATTTCATGTCTTAAGGGATGCCTTACCATTCTTTCATTTATCAAACTTCTTTTGA | 492 | 0.4167 | METKLELLHGTIEATIFNATPCAPAFPFNCIRANGKPAYVTIKLGNKKVAKTSEERDRVWNQTFQIQCAQPEDSIVILTLKISCSVLGRFHIQAQKLLKEESLINGFFPLQMENGKPNPQLKLRFLLWFKPAGLEPSWEKLPRDGEFHVLRDALPFFHLSNFF | 163 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele38g0309 | 163 | Gene3D | C2 domain | 7 | 129 | IPR035892 | - | |
| Lele38g0309 | 163 | Pfam | C2 domain | 38 | 110 | IPR000008 | - | |
| Lele38g0309 | 163 | SUPERFAMILY | C2 domain (Calcium/lipid-binding domain, CaLB) | 36 | 131 | IPR035892 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele38g0309 | Lele-ChrLele38 | 2423478 | 2424255 | Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele38g0309 | 30 | 153 | Phospholipase D Gene Family (Wang group) | AT1G55180 | 53.968 | 7.20e-40 | 140 |