Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0307 ATGTCACTGTGGTACGGGCACAGTAGGTGCGAAGAGGACTGGTTGACGGAGCCAGAGAGTTTGGAACGCGTTCGGAAAATGCGATCCATCGGAGATCCAATGTGGAAAATCTACAGAGGCGAAGAGATTGTGGACATGGAAGGCGTTCCTCTGGTGAGCTACCCTTTGAAGGTGATGCATGAAGGTTTGGTAGAAGAAGTGAATGAGTGTAAGGGTGGTTTTCCTGATACAGTGTACAGTGAAGGGGAAGAGATCCAAGGTGTTGCCTCCTGTCACCACTACTTAGCCACGCAACACCAGAGATCCAAGGTCAAAATCAGTTTAAGATGTACATCCACATTTTCTGGTCCAGGTGGAAATCAGATTAAGATCATCACCAATGACAATAGCCTTTGCTTTTCCTAG 405 0.4716 MSLWYGHSRCEEDWLTEPESLERVRKMRSIGDPMWKIYRGEEIVDMEGVPLVSYPLKVMHEGLVEEVNECKGGFPDTVYSEGEEIQGVASCHHYLATQHQRSKVKISLRCTSTFSGPGGNQIKIITNDNSLCFS 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0307 134 Pfam Phospholipase D C terminal 13 77 IPR024632 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0307 Lele-ChrLele38 2419146 2421252 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0307 1 77 Phospholipase D Gene Family (Wang group) AT1G55180 51.852 1.50e-18 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g0969 41 19144441 19150516 Lele38g0307 38 2419146 2421252 CCT
Lele42g0938 42 22090142 22097287 Lele38g0307 38 2419146 2421252 CCT
Lele38g0307 38 2419146 2421252 Lele38g0307 38 2419146 2421252 ECH
Lele38g0307 38 2419146 2421252 Lele39g1099 39 19563599 19568913 hybridization