Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0296 ATGGCGCTGGGGCTGTTGTTTTTCATGATAATTAAGCTGCATTTAGTTATCAGTGCCACACATTTTCATGGATATGAAGTCACCAATCAACACCATTCCAGAAGCCACACAAGTATTGCTCTCCCCCCAACCAAGTCATCTTATGGAGTTCCTGAAAGCATTGCACTTCTACCTTCTAAGTCATCATCTAAGGCTCCGATAGAGGAACAGACCCATGGTTTAGTACATTCTCCTATATTACATCGTAGGCATCACCATTCCAGAAGAAAGTCTGGTGAACCAGCACCAGAGCCAACTTACTCAGTTGATCCACCCACCTACAGTCATCAAGGTATGGGTCCTTCTGTCTTCCAACCACAACCTCCTTTCTCTTCACCAGAGCACTGGAAATTACCTGCACCTGCACCATCACCAGCTGTTCTATCAGGCCACTTGAATGTGCCTTCTCCTTCACCTGGAATTACACCTCAGGGTTCACCATTGAGGAAGATGAAGACTCCACCAAAAGCACCTGTTTTGGGTCTGCCACCTCCACCTCCTAATAAGGACTGTATATGGGTGACTTGCTCAGAGCCCTTTACATATGCACCTCCTGGATCACCTTGTGGCTGTGTATTTCCACTTCAAGTTAAGCTTCGCCTTGGGATTTCAATATACAAGTTCTTCCCATTGGTGTCAAAGCTAGCCGAGGAAATTGCTGCCAGTGTTTTACTGAAGCATAACCAGGTTCGCATTGTGGGAGCTGATGAAGCTAGTCAGCAACTGGAGAAAACTATTGTTCTCGTAAACTTGGTACCCACGGGATCGAGATTTGATGATGCAACAGCATTTTCAATATATAAGAAATTCTGGCGCCGGGAGATCCACACAGATGCTTCCCTTTTTGGTGCCTGTGAAGTTCTCTATGTTCATTATCCAGGTATTCCTCCTTCTCCGCCTTCAATTCCCTCAAACATTGATAGCCCATTGTTCCCTGGTAATGACAACAACCGAACAATGATGAAACCTTTGGGAGTGGCTATACCAAGGAAAGAGAAGACAGGGAGCGGCAAAAACATGATTTTAGTAATTGTGCTGTCATCTTTAACAGCTTTTATTATACTTGTTGGATTTGCATGGCTTTGTCTGACGAAATGTGGCCCTTGTGTTCGTGAGAGTAAACAAATTCCGACCACAATTCCATCCTCTTCAAAACCATCAGGGAGTGCCAGGTCATTGACCAATAGGAGAATGCCGGGATTTGGTCCTACGCCCTTAAGTTGTAGAACGATAACGTATACAGGATCTGCTAAGACTTTTACTCTGAATGACATAGAGAAAGCAACTAACAACTTTGACGCTTCAAGAATATTAGGAGAGGGGGGCTTTGGGCCTGTTTATAAAGGGGTTCTATATGATGGAAGAGATGTGGCTGTGAAGATTCTCAAGAGACATGATCAGCATGGTGGCCGTGAATTCTTAGCAGAAGTCGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTGATAGGTATATGCATAGAGAAACAGACCCGGTGCCTTGTCTATGAGCTTGTCCCTAATGGAAGTGTGGAATCCCACTTACATGTTGCTGAAAAAGAAACCAATCCACTCGATTGGAATGCCCGGATGAAGATTGCACTTGGTGCAGCTCGCGCCTTGGCTTATCTGCACGAAGATTCGAATCCATGTGTCATACATAGGGACTTTAAATCCAGCAACATCTTGTTGGAACGTGATTTTACACCCAAGGTTTCAGATTTTGGATTAGCGAGAACTGCCCTTGACGAGGGAAACAAGCACATCTCCACACAGGTTATGGGAACATTTGGCTACCTAGCACCTGAATATGCAATGACAGGCCATGTTCTGGTCAAAAGTGACGTTTACAGTTATGGAGTGGTACTTCTTGAGCTCCTAACTGGAAGAAAGCCTGTAGATTTCTCACAACCACCAGGTCAAGAAAACCTTGTTACTTGGGTTCGTCCACTTCTCACAAGTAAGGAGGGCTTAGAGATGATCATAGACCCGGTTATAAAGCCCGAAATCACTGTTGATTCTGTTGTAAAAGTTGCAGCAATTGCATCAATGTGTATTCAACTCGAAGTCTCTCAACGCCCGTTCATGGGCGAAGTTGTTCAGGCTTTGAACCTAGTATGCAGTGAGCTTGAGAAAACAAGCACAAGAAAATTAAAGAGTTTCCAAGAAGAGGGCCTTCAAGCCAAAGTAGATGAACGATCTTCCAGAATTTCAGGCGAGATAGTGAATTTTTCAGATCATGAAATCAAAGTAGCATTATCAGCATCAGAGTTTTTCAGCACATCAGGCCAGTGTTTGGAGTCATTCAGGAGGCATCATTCCAATTCAGGGCCTCTCACTACAGGAAAGAAAAAGCAGTTCTGGCAGAAACTGAGGAGTTTGTCTAGAGGGAGCATGAGTGAGCATGGCAGTTCAACTCAACAATGGTCTGGTTCTCAGTAA 2487 0.4427 MALGLLFFMIIKLHLVISATHFHGYEVTNQHHSRSHTSIALPPTKSSYGVPESIALLPSKSSSKAPIEEQTHGLVHSPILHRRHHHSRRKSGEPAPEPTYSVDPPTYSHQGMGPSVFQPQPPFSSPEHWKLPAPAPSPAVLSGHLNVPSPSPGITPQGSPLRKMKTPPKAPVLGLPPPPPNKDCIWVTCSEPFTYAPPGSPCGCVFPLQVKLRLGISIYKFFPLVSKLAEEIAASVLLKHNQVRIVGADEASQQLEKTIVLVNLVPTGSRFDDATAFSIYKKFWRREIHTDASLFGACEVLYVHYPGIPPSPPSIPSNIDSPLFPGNDNNRTMMKPLGVAIPRKEKTGSGKNMILVIVLSSLTAFIILVGFAWLCLTKCGPCVRESKQIPTTIPSSSKPSGSARSLTNRRMPGFGPTPLSCRTITYTGSAKTFTLNDIEKATNNFDASRILGEGGFGPVYKGVLYDGRDVAVKILKRHDQHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLVYELVPNGSVESHLHVAEKETNPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLERDFTPKVSDFGLARTALDEGNKHISTQVMGTFGYLAPEYAMTGHVLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWVRPLLTSKEGLEMIIDPVIKPEITVDSVVKVAAIASMCIQLEVSQRPFMGEVVQALNLVCSELEKTSTRKLKSFQEEGLQAKVDERSSRISGEIVNFSDHEIKVALSASEFFSTSGQCLESFRRHHSNSGPLTTGKKKQFWQKLRSLSRGSMSEHGSSTQQWSGSQ 828
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0296 828 MobiDBLite consensus disorder prediction 388 410 - -
Lele38g0296 828 MobiDBLite consensus disorder prediction 61 106 - -
Lele38g0296 828 MobiDBLite consensus disorder prediction 388 407 - -
Lele38g0296 828 PANTHER OS01G0750732 PROTEIN 176 738 - -
Lele38g0296 828 ProSiteProfiles Protein kinase domain profile. 445 721 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0296 828 Pfam Protein tyrosine and serine/threonine kinase 448 718 IPR001245 GO:0004672|GO:0006468
Lele38g0296 828 SUPERFAMILY Protein kinase-like (PK-like) 425 718 IPR011009 -
Lele38g0296 828 FunFam Receptor-like serine/threonine-protein kinase ALE2 521 736 - -
Lele38g0296 828 ProSitePatterns Serine/Threonine protein kinases active-site signature. 567 579 IPR008271 GO:0004672|GO:0006468
Lele38g0296 828 CDD STKc_IRAK 451 719 - -
Lele38g0296 828 FunFam receptor-like serine/threonine-protein kinase ALE2 418 520 - -
Lele38g0296 828 Gene3D Phosphorylase Kinase; domain 1 420 520 - -
Lele38g0296 828 MobiDBLite consensus disorder prediction 807 828 - -
Lele38g0296 828 Gene3D Transferase(Phosphotransferase) domain 1 521 745 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0296 Lele-ChrLele38 2323162 2327467 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0296 181 821 Receptor kinase-like Gene Family AT5G56890 58.663 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Lele38g0296 PK_Tyr_Ser-Thr 8.4e-48 CL0016