Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0280 ATGTCTTTTCTTTTCTCTTTCCACATAACGCCGTTAGAATCGAATCTCTCATTCTTCTTGACGTCTACTTCTGTGAAGAACAAAATGATACCCCCTGGTCTCGTCTCCAATCTTCAACAAGCCCTGCTCAGCAGGAAAGGAGCCGAACAAGGCGACCAATCAGAGAACGGTGCCGAATCTACCGAACCTTCTTCTTCTACTTCCGGGCCTGATTCCGCGGAGATCATTGATAATTCGAAGCCTATTGTCTTGGTCACCAATAGTGAAGGAATTGAGTCCCCTGGCCTTACTTTGCTGGTTGAAGCTCTTGTTCGCGAAGGCCTCTACAATGTTCATATCTGCGTTCCTCAATCGGACAAATCAGCTGCAGGGCACTCTCTAACGTTCAGAGAAACGGTGGAAGCGGGTTCTGCTCAAATTGATGGTGCCACTGCGTTTGAGATTTCAGGAACTCCTGTGGATTGTGTTTCACTAGCGTTATCAGGGGCGTTGTTTTCATGGTCAAAGCCTATGCTGGTTATTAGTGGAATTAATAGAGGGTCAAACTGTGGTCATCACATGTTCTACTCAGGTGTTGTTGCTGGAGCTAGAGAGGCATTACTTTGTGGTGTACCATCACTGTCAATATCATTGAATTGGAAAAAGTATGGAAGTCAAGAAACAGATTTCAAGGATGCAGTAGCAGTCTGTTTACCGGTGATAAATGCAGCTGTAAGGGATATTGAAAAGGGAACTTTCCCCAAAAGCTGCTTTTTGAATATAGAAATTCCAACATCTCCCCTGGGTAACAAGGGTTTCAAATTGACCAAGCAAAGTATGTGGAGATCCACTCTAAACTGGCAAGCCGTTTCAAGTAGTCGCTACCCTCCTGCTCAGCACATGGCTAATCAACAAGGCCTTGGCATTCAGCTTGCGCAGCTTGGCCGAGATGCCTCTGCTGCTGGTGCAGCTCGTCGATTGACTACACAGAAAAAGAATTTAGAGGTTGTTGAATCAGTTGGAGCTGCGGGAAAGCCTAAGTTCAGCAAAGTGAAGAAATATTTCAGATTAGAGTTTTCAGAAAAGCAGCAGGAAGATCTGGAAGATGATCTGGATTATAGAGCGCTTGAAAATGGATTTGTTGCAGTAACCCCACTCTCAATTTCTCCTCATGTTGAATCTGATATCCAAACGGCAGCTTCTGATTGGATCTCTACTGTGATTCCAATTGAACAATGA 1218 0.4466 MSFLFSFHITPLESNLSFFLTSTSVKNKMIPPGLVSNLQQALLSRKGAEQGDQSENGAESTEPSSSTSGPDSAEIIDNSKPIVLVTNSEGIESPGLTLLVEALVREGLYNVHICVPQSDKSAAGHSLTFRETVEAGSAQIDGATAFEISGTPVDCVSLALSGALFSWSKPMLVISGINRGSNCGHHMFYSGVVAGAREALLCGVPSLSISLNWKKYGSQETDFKDAVAVCLPVINAAVRDIEKGTFPKSCFLNIEIPTSPLGNKGFKLTKQSMWRSTLNWQAVSSSRYPPAQHMANQQGLGIQLAQLGRDASAAGAARRLTTQKKNLEVVESVGAAGKPKFSKVKKYFRLEFSEKQQEDLEDDLDYRALENGFVAVTPLSISPHVESDIQTAASDWISTVIPIEQ 405
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0280 405 MobiDBLite consensus disorder prediction 45 74 - -
Lele38g0280 405 PANTHER 5'-NUCLEOTIDASE SURE 77 400 IPR030048 GO:0008252
Lele38g0280 405 Gene3D - 72 398 IPR036523 GO:0016787
Lele38g0280 405 Pfam Survival protein SurE 83 275 IPR002828 GO:0016787
Lele38g0280 405 MobiDBLite consensus disorder prediction 45 75 - -
Lele38g0280 405 Hamap 5'/3'-nucleotidase SurE [surE]. 81 401 IPR030048 GO:0008252
Lele38g0280 405 SUPERFAMILY SurE-like 82 391 IPR036523 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0280 Lele-ChrLele38 2242708 2246480 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0280 38 2242708 2246480 Lele39g1127 39 19775584 19780152 hybridization
Lele38g0280 38 2242708 2246480 Lele40g0266 40 2124915 2128358 hybridization