Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0265 ATGATAAAGTTATGCAAACGGACCGGCTCCCGCCACACCGCCTTACCAGCTCGATATTTTCCCACAAACCAATACGGGAACCTTCTCTGTACCTGTTCCGCTGTTCGCGCCTTCCTTCTCTTTATTGCACCCAACCCTAACCCTAATCCCCTGGAAGCCACACGAATGGCGTACCATTCCCCTGATAGCGAATCAGGATCCGACCGGCAAACCCCAACGCGCCTCTATAATCCTTACAAGGACCTCGAAGTCCCGATTCGAAACCTATACCAGCTTCCAACGTCCCCTGAGTATCTCTTCGTCGAGGAGGCTCGGCGTAAGCGTCGATCCTGGGGTGAAAATCTCACCTTTTACACCGGCTGCGGCTACCTTGCGGGCACCGTTGGTGGTGCCGGCGTTGGCCTGGTCGATGGCGTGAAATCTTTTGAATCTGGCGACACCACGAAGCTCCGAATAAACAGGGTGCTTAACGCTTCTGGCCATTCGGGTCGGTCTTGGGGTAACCGAATTGGTGTTCTTGGATTGTTATATGCCGGTATAGAGAGCGGGATAGGGGCCGTGAGGGACGCTGATGATGGGTGGAATAGTGTATCGGCGGGGCTCGGTACTGGTGCATTGTATCGTGCTGCGAGAGGGATGAGATCAGCTGCGGTGGCGGGAGCGGTAGGCGGAATTCTAGTCGGTGTGGCCATAACCGGCAAGCAAGCCTTGAAACGATACGTGCCAATTTGA 732 0.5492 MIKLCKRTGSRHTALPARYFPTNQYGNLLCTCSAVRAFLLFIAPNPNPNPLEATRMAYHSPDSESGSDRQTPTRLYNPYKDLEVPIRNLYQLPTSPEYLFVEEARRKRRSWGENLTFYTGCGYLAGTVGGAGVGLVDGVKSFESGDTTKLRINRVLNASGHSGRSWGNRIGVLGLLYAGIESGIGAVRDADDGWNSVSAGLGTGALYRAARGMRSAAVAGAVGGILVGVAITGKQALKRYVPI 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0265 243 MobiDBLite consensus disorder prediction 60 74 - -
Lele38g0265 243 MobiDBLite consensus disorder prediction 52 74 - -
Lele38g0265 243 Pfam Tim17/Tim22/Tim23/Pmp24 family 117 226 - -
Lele38g0265 243 PANTHER TIM23 85 230 IPR045238 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0265 Lele-ChrLele38 2135997 2136728 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0265 63 243 Chloroplast and Mitochondria Gene Families AT1G72750 69.022 1.46e-77 230
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele41g1016 41 19462932 19470163 Lele38g0265 38 2135997 2136728 CCT
Lele42g0984 42 22462632 22468743 Lele38g0265 38 2135997 2136728 CCT
Lele38g0265 38 2135997 2136728 Lele40g0252 40 2004828 2007379 hybridization