Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0255 ATGAATTTGCAACAAGTTGGCCAGCCCAAATCTTTTAATGGATATGGCCGCCGAAAATCTGAAAGAGAAGGAGCATTTAGGTCAGAGAACAAGATCCAGTCTGGAAAATCAAATGCCAGCAGATTAGCAAGTACTGTGACTGGCACTAAAGGTGATTATCATGAGAGTCCTTCAGGTGATCGATTATTGTATATAGCAACTTGCCTCATTGGGCAACACGTGGAAGTCCATGTGAAAAGTGGATCTATATACTCTGGAATTTTCCATGCAGCAAATGCTGACAAAGATTTTGGAATCATTTTGAAGATGGCTCGCTTGATGAAGGATAGTTCTATTCGAGGGAAGAGGTCTGCTGTAGAATTTGTTAGCCAAGCTCCTTCAAAGACATTAATTGTATCTGGCAAAGATCTTGTACAAATCATGGCAAAGGATGTTGCTGTTACTCGGGATGAACTTTGTGGTGAGGCTCATCATGAAATGCATCAGGAGATTATGGTTGATTCAGCAATATCTCAATCTCGTCATGTCGAGATGGAAAGAGAACTATTACCCTGGGTACCTGATGGAGATGATTCACAATGCCCTGAACTGGAAAATATATTTGATGGCCCTTGGAATAGAAGATGGGATCAATTTGAAACAAATGAAGCATTGTTCGGTGTAAAAAGCACATTCAATGAGGAATTATATACAACAAAGCTTGATAAAGGGCCTCATATGAGAGAGTTGGAAAAACAAGCTTTAAGAATAGCAAGAGAAATTGAGGGTGAGGAAACCCGAGATCTTCATTTAGCAGAGGAAAGAAGTATACACCTACATGAAGACTTTGATATTGATGAAGAGACCAGATTCTCATCAGTCTACAGGGGTAAAGGGGTTGATGAAAGTGGACATGATGAAAGAGAAGATATACAAATAGATTCCCGGAATTCTGAAACATTTGGTGGTACGTTTGCTCCAGTCGTCAAGAAATCCAGTGATTTAGCCAGTGGAGAAGGCAATGGTGGAGCTCGACTATCATCAGATTCCTCCGTTATGGATCTCCCTCATTCATCTCAGTCAAATATTGGCATGGATGTAAGCCACTCTAGTACTTATGATCCTGCCAAACAATTAGCATCTGAACTCCCTGCCAAAAGTTACACATCTTTGGATGGAGAAAGGGTTCAGGATTCAATTGTTGATCAACACGGAGCAAATGATAGTAGCAAGGAAGAAAATCAGATCCAGCAGGCTGAGGATGATCAACCGTCAAAATCTGAGGATTCACAGTCACTGCTCAACTTGAAGAAAGATGGCTCTGATAAAGGGGAATTAAATGCCTCCTCTTTTGCCCCTTCATCTCATGTTTTATTAAGTACTCAAGAAAAGGCAGGGTCACCTGGAGATATGGTTGTGAGTTCAGCTTCAGGCAAAGTGAATGGGGATACAAAGTCTGAGAACTCCCATGGAAGACCAGGTAGTTCTGCTTCATCTGCTTCAGAGCCTGTGGGAGGTTTGACAGCATCTTCTCGTCCTGGCCTCTCGCCAAGTTCTTCAATTGGTTCATTTTCTTCTGAAAGATCAACTCTGAATCCCAATGCAAAGGATTTCAAGCTCAACCCAAATGCAAGGAGTTTCATTCCATCTCAAACACCTAGACCTCCCTCGCCAGTGTCTGATGCTTCATTCTATTTCCCAACTAATGTAACTAGTGTGCCGCATATGCCAACCATGCCCGTTGGTGTTGGGATGGGACCTACATTTACGGGGCCACAGCAGGCCATATATAATCCACAGGTTGCACAAGTGCCATTGACATATTTTCATCCAAATGGACCACAGTATGGGCAGCTTGTTGGTCATCCCAGGCCAGTCATGTACATGCCACCAGGATACATACCTGAAACTCAGTATAGGGGACGGGATTATTAG 1914 0.4258 MNLQQVGQPKSFNGYGRRKSEREGAFRSENKIQSGKSNASRLASTVTGTKGDYHESPSGDRLLYIATCLIGQHVEVHVKSGSIYSGIFHAANADKDFGIILKMARLMKDSSIRGKRSAVEFVSQAPSKTLIVSGKDLVQIMAKDVAVTRDELCGEAHHEMHQEIMVDSAISQSRHVEMERELLPWVPDGDDSQCPELENIFDGPWNRRWDQFETNEALFGVKSTFNEELYTTKLDKGPHMRELEKQALRIAREIEGEETRDLHLAEERSIHLHEDFDIDEETRFSSVYRGKGVDESGHDEREDIQIDSRNSETFGGTFAPVVKKSSDLASGEGNGGARLSSDSSVMDLPHSSQSNIGMDVSHSSTYDPAKQLASELPAKSYTSLDGERVQDSIVDQHGANDSSKEENQIQQAEDDQPSKSEDSQSLLNLKKDGSDKGELNASSFAPSSHVLLSTQEKAGSPGDMVVSSASGKVNGDTKSENSHGRPGSSASSASEPVGGLTASSRPGLSPSSSIGSFSSERSTLNPNAKDFKLNPNARSFIPSQTPRPPSPVSDASFYFPTNVTSVPHMPTMPVGVGMGPTFTGPQQAIYNPQVAQVPLTYFHPNGPQYGQLVGHPRPVMYMPPGYIPETQYRGRDY 637
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0255 637 MobiDBLite consensus disorder prediction 289 369 - -
Lele38g0255 637 SMART LsmAD_2 219 290 IPR009604 -
Lele38g0255 637 MobiDBLite consensus disorder prediction 440 455 - -
Lele38g0255 637 MobiDBLite consensus disorder prediction 397 437 - -
Lele38g0255 637 MobiDBLite consensus disorder prediction 30 52 - -
Lele38g0255 637 MobiDBLite consensus disorder prediction 1 56 - -
Lele38g0255 637 Pfam Ataxin 2 SM domain 60 143 IPR025852 -
Lele38g0255 637 MobiDBLite consensus disorder prediction 470 541 - -
Lele38g0255 637 MobiDBLite consensus disorder prediction 289 308 - -
Lele38g0255 637 MobiDBLite consensus disorder prediction 336 369 - -
Lele38g0255 637 PANTHER ATAXIN 2-RELATED 34 627 IPR045117 GO:0003723
Lele38g0255 637 MobiDBLite consensus disorder prediction 397 551 - -
Lele38g0255 637 Pfam LsmAD domain 219 289 IPR009604 -
Lele38g0255 637 Coils Coil 240 260 - -
Lele38g0255 637 MobiDBLite consensus disorder prediction 15 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0255 Lele-ChrLele38 2026165 2030916 Dispersed/Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0255 38 2026165 2030916 Lele38g0255 38 2026165 2030916 ECH
Lele38g0255 38 2026165 2030916 Lele39g1166 39 20345646 20351449 hybridization
Lele38g0255 38 2026165 2030916 Lele40g0238 40 1888411 1894075 hybridization