Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0251 ATGTTAACCTGCATTGCTTGTTCCAAGCAGCTTAATGACAAGAGATCTCTTCCTCAACAAGATGAGCACGAAGAAGCTGTGGACACACCCAGCACCAAGCAGGCCATTAAGGCCCTCACCGCTCAGATCAAGGACATGGCAGTGAAGGCTTCTGGGGCGTATAAAAATTGCAAGCCTTGTTCAGGATCTTCGAATGGTAACAGGAATCAGAACTATGCTGATTCTGATATGGCTTCAGGATCAGCGAGATTTCACTGGGCGTACAAAAGGGCTGGGAGCTCAAACTCAACCCCAAGGCTTTGGGGAAAGGAGATGGAGGCGAGACTGAAAGGACTCTCTAGCGGGGAAGGAACTCCGGCGTCGGTGAGTGGCCGGACTGAGTCGGTGGTGTTCATGGAGGAGGATGAGCCCAAAGAATGGGTTGCTCAAGTAGAACCTGGTGTACTTATCACCTTCGTTTCATTGCCTCAAGGTGGGAATGATCTGAAACGAATACGGTTCAGCCGGGAGATGTTTAATAAATGGCAAGCTCAAAGGTGGTGGGCTGAGAATTATGACAAGGTCATGGAGTTGTACAATGTTCAAAGGTTCAATGAACAAGTTGGTCCACTGCCAACCCCGCCAAGATCGGAAGATGAGAGCTCGAAGATTGAATCTGTAAGGGACAGCCCTGTCACGCCTCCTCTTAACAAAGAGCGTCCACCTCATCATCTTCTCCACCGTCAAATGGGAATGGGATACTCCTCATCGGATTCACTGGATCATCAGCACTCGATGCAACAACAACGCCCATGCTATGAAACGAGCGGCTTAGCTTCAACACCTAAGCTTTCTAGCATCAGTGGGGCAAAGACCGAAACATCATCCTTAGACGGTTCTGTGAGGACTAGTTCATCAAGAGAGGGAGATCAGTCAGGCGAGTTTTCGCTCAGCAATGCCAGTGATATGGAGACTGAATGGGTTGAACAGGATGAACCAGGAGTATACATCACCATCAGAGCGCTTCCAGGGGGAACTAGAGAACTCAGGCGCGTCCGGTTCAGGTTCGCAAATCCATTACCCCACCGAGAAAGGTTTGGAGAAATGCACGCGAGGTTGTGGTGGGAGGAGAACCGGGCGAGGATACAGGAGCAATATTTGTGA 1143 0.4996 MLTCIACSKQLNDKRSLPQQDEHEEAVDTPSTKQAIKALTAQIKDMAVKASGAYKNCKPCSGSSNGNRNQNYADSDMASGSARFHWAYKRAGSSNSTPRLWGKEMEARLKGLSSGEGTPASVSGRTESVVFMEEDEPKEWVAQVEPGVLITFVSLPQGGNDLKRIRFSREMFNKWQAQRWWAENYDKVMELYNVQRFNEQVGPLPTPPRSEDESSKIESVRDSPVTPPLNKERPPHHLLHRQMGMGYSSSDSLDHQHSMQQQRPCYETSGLASTPKLSSISGAKTETSSLDGSVRTSSSREGDQSGEFSLSNASDMETEWVEQDEPGVYITIRALPGGTRELRRVRFRFANPLPHRERFGEMHARLWWEENRARIQEQYL 380
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0251 380 Pfam Transcription factor regulating root and shoot growth via Pin3 138 192 IPR013591 -
Lele38g0251 380 Pfam Transcription factor regulating root and shoot growth via Pin3 317 379 IPR013591 -
Lele38g0251 380 PANTHER PROTEIN BREVIS RADIX-LIKE 1 1 380 IPR044532 -
Lele38g0251 380 MobiDBLite consensus disorder prediction 245 317 - -
Lele38g0251 380 ProSiteProfiles BRX domain profile. 318 380 IPR013591 -
Lele38g0251 380 MobiDBLite consensus disorder prediction 200 317 - -
Lele38g0251 380 Pfam Transcription factor BRX N-terminal domain 24 60 IPR027988 -
Lele38g0251 380 ProSiteProfiles BRX domain profile. 138 193 IPR013591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0251 Lele-ChrLele38 1991450 1994474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0251 1 380 Major Intrinsic Protein MIP AT1G31880 46.212 2.62e-98 295
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0251 38 1991450 1994474 Lele38g0251 38 1991450 1994474 ECH
Lele38g0251 38 1991450 1994474 Lele39g1173 39 20409877 20413883 hybridization
Lele38g0251 38 1991450 1994474 Lele40g0235 40 1859348 1862349 hybridization