Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0240 ATGGGAAGGAGCCCTTGCTGTTCCAAGGAAGGTTTAAATAGAGGAGCATGGACAGCTGCTGAAGACAAGATTCTCATTGAATACATCAAGCTTCATGGTGAAGGAAAATGGCGACACCTTCCCAACAAAGCAGGTCTTAAGAGATGCGGGAAGAGTTGTAGACTGAGATGGCTAAATTATCTAAGACCTGATATCAAAAGAGGAAATATTACTCATGACGAAGAGGATCTCATTATCAGGCTTCACAATCTTCTTGGAAATAGGTGGTCTTTGATAGCTGGGCGACTACCAGGACGAACAGACAATGACATAAAGAATTATTGGAACACCAACATCGGAAAGAAGCTTGGTAACTCGAAATTCGTTGAACTTGGATCCTCAAGTTTAGCCGGGCAAGACTCCGACCCGGATCCAGATCAGCTTGACCTAATAAAACGCACACCAAAGACCACCGGTTCCTGCCTGATTCGAACCAAAGCAACAAGCTCTGATGGATAA 498 0.4418 MGRSPCCSKEGLNRGAWTAAEDKILIEYIKLHGEGKWRHLPNKAGLKRCGKSCRLRWLNYLRPDIKRGNITHDEEDLIIRLHNLLGNRWSLIAGRLPGRTDNDIKNYWNTNIGKKLGNSKFVELGSSSLAGQDSDPDPDQLDLIKRTPKTTGSCLIRTKATSSDG 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0240 165 FunFam MYB-related transcription factor 13 66 - -
Lele38g0240 165 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele38g0240 165 Pfam Myb-like DNA-binding domain 67 110 IPR001005 -
Lele38g0240 165 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele38g0240 165 Gene3D - 14 66 - -
Lele38g0240 165 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 126 - -
Lele38g0240 165 CDD SANT 71 112 IPR001005 -
Lele38g0240 165 SMART sant 13 63 IPR001005 -
Lele38g0240 165 SMART sant 66 114 IPR001005 -
Lele38g0240 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 66 116 IPR017930 -
Lele38g0240 165 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 65 IPR017930 -
Lele38g0240 165 MobiDBLite consensus disorder prediction 127 148 - -
Lele38g0240 165 SUPERFAMILY Homeodomain-like 12 108 IPR009057 -
Lele38g0240 165 CDD SANT 16 61 IPR001005 -
Lele38g0240 165 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele38g0240 165 Gene3D - 70 132 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0240 Lele-ChrLele38 1896620 1897872 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0240 1 116 MYB Transcription Factor Family AT2G16720 75.000 1.67e-63 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele38g0240 Myb_DNA-binding 3.3e-15 CL0123