Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0237 ATGAGCGATTGGATGGGGTTTTCTCTGACTCCGCACTTGAGGATTGATGAAGTATATGGGAATGGCAGAGAAAACCAAGAAGAACACCGTGGAGGTTATCCTCCTTCTCATCCTCGCTTGTCGGTTATGCCTTTAAGATCAGATGGCTCTCTCTGTGTTGCCGACCCTTTTAGGCACTCTGGTGCAGCTGAAGAATGGAGATATGATAATGGAGTAGCAGGAGGAAGCTCCAATGAAGAAGGTCCAAAGCTTGAAGATTTCTTGGGTTGTTACTCAAACTCCTCTGATATTGCTGAAACCAAAGTGTATTGCCAAGGCAGTACACAACAACCAGACCAAGACCAGAACCAGAACCAGGACAACATTTCGAGCAGAATCAATGTGAATGTGGCCCCAAGCTTCAGCACCAACACTGAGATAGAAGCTAATGGGGGAAATTTCACAAACCCTCCTTCCTTAATCCAATCTTTTCATGCATACAATGATGGTAACCAGCGAGCTGTAATCCCAAATAATGGCATGTACAAGTCCTGGTTGGCTCAATCTCAATCTTCTGCTGAAGCGAATGGCTATAACTACCAATCTCTAGCCCTAACTATGAGTCCTAGTGTACCAAACGCTCTCTGTGGTGCAATTTACCCGGTTCAAGTTGAAGATGATGCTCGTAAAAGGTCAATGACAAAATCTCTTGCTGCTAGAGAACCTGTGCCTCGCAAATCTATTGATACCTTTGGTCAAAGAACATCTCAATATAGAGGTGTTACAAGGCATAGATGGACTGGGAGATATGAGGCCCATTTGTGGGATAATAGTTGCAGGAAGGAAGGGCAAACAAGGAAAGGAAGACAAGGTGGTTATGATAAGGAAGAAAAAGCAGCAAGAGCTTATGATTTAGCTGCGCTCAAGTATTGGGGTCCAACTACTCACATAAATTTCCCTTTAAGTACATACGAGAAGGAACTTGAAGAGATGAAGCACATGACTAGGCAAGAATTTGTGGCTAATTTGAGAAGGAAGAGCAGTGGATTTTCAAGAGGTGCTTCTGTGTATAGGGGCGTGACAAGACACCATCAACATGGAAGGTGGCAAGCTAGGATTGGTAGAGTTGCAGGAAACAAAGACTTGTATCTCGGTACATTTAGCACACAAGAGGAAGCTGCAGAAGCATACGATATTGCAGCGATAAAGTTCAGGGGAACTAGTGCTGTGACCAACTTCGATATAAGCCGGTATGACGTGAAGAGGATATGCTCGAGCTCCACTCTCATTGCGGGAGATCTGGCAAAGAAGTCTCCTGAAGAGTTAGCTCCAGCTCCCGGTGTCGCCACCGCCACGACCAACGACTTCAATTCTAATGCATCGTCGTTGGAGGTGACAACGGCTCATCAGCAACAGCCACAGCCGTTTTTGGCTGTAACAAATGGGGAGCACTCTTCTGATGAGTTGGCCAACATGTTTTGGAATGATGACGGGAACCCCAACGAGAAACAGGTGAATGATCAGAGTAATTCGGACAACAGCAAGAATAATAACAATGCTCAGAATGCTTCGAACTCAGAAGAAAGTGCCAAGTGTTCTGTGGGGATGGGGAAGGAGTTTGGGGTGAATGGTTCAGGGTTTGGAGGTGGGTTCTTCTCGTTGCAGGGACCCAAGTATAATGCTGATGACGATGATGATGGGAACAACGACGACAGCGGTAATGATAAGTTGAATAATGACAATCCGATTGGGAACATGGGACTGGTTCATCCAGTTCCCATGTTTGCTTTGTGGAATGAATGA 1782 0.4545 MSDWMGFSLTPHLRIDEVYGNGRENQEEHRGGYPPSHPRLSVMPLRSDGSLCVADPFRHSGAAEEWRYDNGVAGGSSNEEGPKLEDFLGCYSNSSDIAETKVYCQGSTQQPDQDQNQNQDNISSRINVNVAPSFSTNTEIEANGGNFTNPPSLIQSFHAYNDGNQRAVIPNNGMYKSWLAQSQSSAEANGYNYQSLALTMSPSVPNALCGAIYPVQVEDDARKRSMTKSLAAREPVPRKSIDTFGQRTSQYRGVTRHRWTGRYEAHLWDNSCRKEGQTRKGRQGGYDKEEKAARAYDLAALKYWGPTTHINFPLSTYEKELEEMKHMTRQEFVANLRRKSSGFSRGASVYRGVTRHHQHGRWQARIGRVAGNKDLYLGTFSTQEEAAEAYDIAAIKFRGTSAVTNFDISRYDVKRICSSSTLIAGDLAKKSPEELAPAPGVATATTNDFNSNASSLEVTTAHQQQPQPFLAVTNGEHSSDELANMFWNDDGNPNEKQVNDQSNSDNSKNNNNAQNASNSEESAKCSVGMGKEFGVNGSGFGGGFFSLQGPKYNADDDDDGNNDDSGNDKLNNDNPIGNMGLVHPVPMFALWNE 593
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0237 593 Pfam AP2 domain 348 399 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 Pfam AP2 domain 250 305 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 ProSiteProfiles AP2/ERF domain profile. 250 313 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 MobiDBLite consensus disorder prediction 490 523 - -
Lele38g0237 593 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 78 503 - -
Lele38g0237 593 MobiDBLite consensus disorder prediction 549 579 - -
Lele38g0237 593 MobiDBLite consensus disorder prediction 482 523 - -
Lele38g0237 593 PRINTS Ethylene responsive element binding protein signature 251 262 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 PRINTS Ethylene responsive element binding protein signature 389 409 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 CDD AP2 249 315 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 CDD AP2 348 409 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 SUPERFAMILY DNA-binding domain 348 409 IPR016177 GO:0003677
Lele38g0237 593 SUPERFAMILY DNA-binding domain 249 315 IPR016177 GO:0003677
Lele38g0237 593 SMART rav1_2 349 413 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 SMART rav1_2 250 319 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 ProSiteProfiles AP2/ERF domain profile. 349 407 IPR001471 GO:0003700|GO:0006355
Lele38g0237 593 FunFam AP2-like ethylene-responsive transcription factor ANT 249 315 - -
Lele38g0237 593 FunFam AP2-like ethylene-responsive transcription factor 348 409 - -
Lele38g0237 593 Gene3D AP2/ERF domain 349 409 IPR036955 GO:0003700|GO:0006355
Lele38g0237 593 Gene3D AP2/ERF domain 249 315 IPR036955 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0237 Lele-ChrLele38 1859735 1863077 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0237 1 432 AP2-EREBP Transcription Factor Family AT1G72570 50.638 1.20e-135 400
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-AP2 Lele38g0237 AP2 1.2e-09 CL0081