LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Lele38g0219	ATGGCCGTAGCTCCGGCAATCTTCCGGCCAACTCTCCTCTTTTTCTCCACCTTCTTCATGGTTTTTCGATTGGTGAATTCAATGTCAGAAGCTCAAGCTTTGGTTAATTTTAAAGCCTCATTCTCATCTTCTCAAGCTCTGAAAGATTGGGTAGTCAACTCTGTTCCTTGCAAAGAAGGGGAAGAATGGGAAGGGGTTATCTGCAACGGTGGATTCATCTCTGGCATTCGATTAGAAGGAATGGGATTGTCAGGGAAGATCGATGTAAATCCATTGCTGGAGCTCAAGGGTCTTCGAATTTTCAGCATTTTGAACAATTCTTTTTCAGGTACAATTCCTGAAATCAATAGGATAGGTTTCTTGAGAGCTCTGTACTTATCGGGAAATCAATTTTCCGGCGAGATTCCGTCGGATTTCTTCCAGAAAATGAGGTCTCTGAAGAAACTATGGCTTAACGACAACAACTTTACGGGTCAGATTCCGTCGCAGATTCCTCTACTCCTCGAGCTACGCCTAGAGAACAATCAGTTTAGCGGTAACCTCCCGAATCTGAGCAAAACACTGTTGATAGAATTCAATGTGTCCAACAATAAATTGGAAGGCGAAATCCCAACGAGCTTATCAAAATTTAGCGCGAGCTCATTTTCCGAGAATCCGAGCCTCTGTGGTGAGAAATTAAACAAACCGTGTCAAAATTCAGTTGAACCGCCAAAACCCATGGAAAATATGGAACAAGAACAAAATAAAGACAGCATCGCATCTGATTCAAACTCTAGCAGTAAGAGTAGCAACACAGTGAAGATTGCCGCCATAGTTGTTGCATCAATTGTAGTACTTCTCGCACTTCTTGCTCTACTCTTTGTTCGATCAAGGCAAAAGAAGAAGGAGAAGGGAATACTGGGTTCAGTCCGATCAGAGAACAACAACGAAGAATCATCAGCATCAGTGGAAGTTCAGGTTGCTTCCCCAGAGAAGAAAGAAGAGGCAGGTATATCCAGAAAATCAAGTCGCAATGGTTCCAGCAGAAGGGGTAAGAGTGGCTGCGGCAACGGTGGTGTTGGAGATCTTGTGATGGTAAATAGTGAAAGGGGTGTGTTCGGGATGCTAGATTTGATGAAGGCAGCAGCAGAAGTTTTGGGGGGTGGAGGGTTTGGGTCATCCTATAAAGCAGTGATGGCTGATGGGGTTGCAGTGGTGGTGAAGAGGATGAGGGAGATGAATGTGTTGACGAAAGATGGGTTTGATGCAGAGATGAGGAAGCTAGGGAGTTTCAGACATAGGAATATCTTAACCCCTTTGGCTTATCATTATAGGAAGGATGAGAAGTTGGTGGTGTCCGAGTTTGTTCCTAAAGGAAGTCTGCAATATTTGCTGCATGGTGATCGTGGACCATCCCATGCTGACCTGGACTGGCCTACCGCTTTAAAAATTGTGCGAGGGATTGTTGAAGGGATGATTTATCTTTACACACAGCTTGCTTCATCTGTTTTACCTCATGGTAATCTCAAGTCTAGCAATATTCTCCTTGGTCCCGATTATGAGCCAATGCTAGTTGATTTTGGGTTATGCTCTTTGATCAACCCTTCTAATCTAAGCCAAGCCCTATTTGCTTACAAGACTCCTGAAGCCTCACAGAAAGGCCAAGTTTCTCCAAAATCTGATGTTTATTGTCTTGGAGTTGTCATTCTTGAGATCCTCTCTGGGAAATTCCCTTCCCAATATCTCAACAACAGCGGTGGAATTGATGTAGTTCAATGGGCTAACTCAGCAATATCTGAAGGAAGGATATTAGAGATGCTTGATCCACAACTTGCAAGCTCTAAAAGTTCTATCGGTCAAATGGAAAGACTCCTCCATGTTGGTTTTGCTTGTACCGCAGATAACCCCGAGCAACGACCAGACATGGCAGAAGTGTTAAGAAGGATAGAGGAAATACAAAATCAAGGTACCCAAGAATCAGGCTCAAAAGGTCAAGATGAGTGGTCCCAGAGAAGTTTTGGATCAAGCAGCGTTGGAAGCCAATCGGGTCACCATAGTCTTGATTTTGCCATTTCCTAA	2058	0.4383	MAVAPAIFRPTLLFFSTFFMVFRLVNSMSEAQALVNFKASFSSSQALKDWVVNSVPCKEGEEWEGVICNGGFISGIRLEGMGLSGKIDVNPLLELKGLRIFSILNNSFSGTIPEINRIGFLRALYLSGNQFSGEIPSDFFQKMRSLKKLWLNDNNFTGQIPSQIPLLLELRLENNQFSGNLPNLSKTLLIEFNVSNNKLEGEIPTSLSKFSASSFSENPSLCGEKLNKPCQNSVEPPKPMENMEQEQNKDSIASDSNSSSKSSNTVKIAAIVVASIVVLLALLALLFVRSRQKKKEKGILGSVRSENNNEESSASVEVQVASPEKKEEAGISRKSSRNGSSRRGKSGCGNGGVGDLVMVNSERGVFGMLDLMKAAAEVLGGGGFGSSYKAVMADGVAVVVKRMREMNVLTKDGFDAEMRKLGSFRHRNILTPLAYHYRKDEKLVVSEFVPKGSLQYLLHGDRGPSHADLDWPTALKIVRGIVEGMIYLYTQLASSVLPHGNLKSSNILLGPDYEPMLVDFGLCSLINPSNLSQALFAYKTPEASQKGQVSPKSDVYCLGVVILEILSGKFPSQYLNNSGGIDVVQWANSAISEGRILEMLDPQLASSKSSIGQMERLLHVGFACTADNPEQRPDMAEVLRRIEEIQNQGTQESGSKGQDEWSQRSFGSSSVGSQSGHHSLDFAIS	685

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Lele38g0219	685	ProSiteProfiles	Protein kinase domain profile.	373	645	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele38g0219	685	MobiDBLite	consensus disorder prediction	246	261	-	-
	Lele38g0219	685	Pfam	Protein kinase domain	377	640	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Lele38g0219	685	MobiDBLite	consensus disorder prediction	223	261	-	-
	Lele38g0219	685	SUPERFAMILY	L domain-like	29	213	-	-
	Lele38g0219	685	Gene3D	Transferase(Phosphotransferase) domain 1	449	668	-	-
	Lele38g0219	685	SUPERFAMILY	Protein kinase-like (PK-like)	377	643	IPR011009	-
	Lele38g0219	685	Gene3D	Phosphorylase Kinase; domain 1	372	448	-	-
	Lele38g0219	685	Gene3D	Ribonuclease Inhibitor	187	230	IPR032675	-
	Lele38g0219	685	Gene3D	Ribonuclease Inhibitor	27	186	IPR032675	-
	Lele38g0219	685	MobiDBLite	consensus disorder prediction	646	685	-	-
	Lele38g0219	685	PANTHER	LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1	17	648	-	-
	Lele38g0219	685	Pfam	Leucine rich repeat N-terminal domain	29	69	IPR013210	-
	Lele38g0219	685	MobiDBLite	consensus disorder prediction	302	349	-	-
	Lele38g0219	685	MobiDBLite	consensus disorder prediction	302	319	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Lele38g0219	Lele-ChrLele38	1718452	1720784	Dispersed/Wgd

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Lele38g0219	12	645	Receptor kinase-like Gene Family	AT3G42880	43.272	1.62e-179	523

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-III	Lele38g0219		Pkinase	3.9e-28	CL0016