Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0189 ATGGATTCTATCAAGTCCTTCAAGGGCTACGGCAAGGTAGATGAGCTCGAGCAGAGAGCTTTCCAGAAGAAGACGCGTCGCCGCCTCATTATCCTCGGTGTCTCCTGCATTGTCCTCGTCGCCATCGTCGCCGCCGCCGCCGCCGCTACCGTCATTCACAAGCGCAGCCGCTCCTCCTCTTCCTCCGATCCCGTCCCTCCTACTGAGTTGACTCCGGCTTCCTCGCTCAAAGCCGTCTGCGCTGCCACTCAGTACCCCAGCTCGTGCTTGTCCAGCATCTCCTCCCTCCCTGATTCTAACACCACCGATCCGGAGCTTCTCTTCAAGCTCTCTCTCAAAGTCGCCGTTGATGAGCTCTCTAAACTCTCGAAGCTTCCTTCCAAGCTCAAAGCCAATGTGAAGGATCCGCGGCTTCAGAAGGCGATCGATGTGTGCGGAATCGTGTTCGACGACTCGGTGGATCGACTCAACGAGTCGGTCTCTTCGCTGGCGGTCGGCGGCAATGGCGGGAGGATCCTCTCCCGGTCGAAGATCGGCGACCTTGAGACGTGGCTGAGCGCTGCGATTACGTGCCAGGAGACTTGTCTGGACGCTCTGGAGGAGTTGAATTCCACCGCCGCAAGCGAGATTCTCGGGGATCTGAAAATGGCGATGAAGAATTCAACCGAGTTCGCGAGTAATAGTTTGGCCATTGTGACGAAGATTCTAGGCCTTCTCTCGAATCTCAACATACCGATCCATCGGAGGCTGCTCGGATTCGGGCGATTCCGTTCTGGTTTTCCGGATTGGGTTGGCCCGGCGGAGAGGAGGTTGTTGGAGGATACGAACACAACGGCCCCGCACGCGGTGGTGGCAAAGGATGGCAGCGGACAGTATACGACGATGAAGGCGGCGTTCGCGGCCGTGAAGAAAAAGAGCCCAACGAGATTTGTGATTTATGTGAAGGAAGGGGTTTACGAAGAAAATATCGATTTGGACAAGAACATTTGGAATGTGATGATATTCGGTGATGGCAAGACCAAGACCATCGTCTCCGGTAGCCTGAACTTTATCGACGGCACGCCTACTTTTGCGACTGCTACGTTCGCCGTCAAGGGGAAGGGATTCATCGCCAAAGACATAGGATTCATCAACACCGCTGGAGCAGCGAAGCACCAGGCTGTGGCGTTCCGGTCAGGCTCCGACCAATCCGTGTTCTTCAGGTGCTCTTTTGACGGCTTCCAAGACACTCTCTATGCCCACTCCAACCGTCAATTCTACCGAGAATGCGACATCACCGGCACCATCGACTTCATCTTTGGCAACTCCGCCGTGGTCTTCCAGAACTGCAACATCAAGCCGAGACAACCCTTGCCAAATCAATTCAACACCATCACGGCTCAGGGCAAAAAGGATCCTAACCAGAACACTGGAATTATCATCCAGAAATCTACTATCTCTGCGGCCGAAAATCTCACCGCTCCTACGTACCTTGGTCGGCCATGGAAGGAGTACTCCACCACAGTGATCATGCAATCTCATATAGGGTCATTCTTGAATCCGGTGGGCTGGAAAGAATGGGTTTCGGGGGTGGAGCCGGCGAGCACCATATTATACGCGGAGTATAAGAATACAGGAGCCGGGTCGGGCGTGGATAAGAGGGTCAAATGGGCAGGATATAAGTCGAGCCTATCGGACGATGAGGCAGCGAAGTTCACGGTTCAGTCTTTTATCCAAGGAAGTGACTGGTTACCGAATACCGCTGTGATGTTCGAATCCACGTTATAA 1767 0.541 MDSIKSFKGYGKVDELEQRAFQKKTRRRLIILGVSCIVLVAIVAAAAAATVIHKRSRSSSSSDPVPPTELTPASSLKAVCAATQYPSSCLSSISSLPDSNTTDPELLFKLSLKVAVDELSKLSKLPSKLKANVKDPRLQKAIDVCGIVFDDSVDRLNESVSSLAVGGNGGRILSRSKIGDLETWLSAAITCQETCLDALEELNSTAASEILGDLKMAMKNSTEFASNSLAIVTKILGLLSNLNIPIHRRLLGFGRFRSGFPDWVGPAERRLLEDTNTTAPHAVVAKDGSGQYTTMKAAFAAVKKKSPTRFVIYVKEGVYEENIDLDKNIWNVMIFGDGKTKTIVSGSLNFIDGTPTFATATFAVKGKGFIAKDIGFINTAGAAKHQAVAFRSGSDQSVFFRCSFDGFQDTLYAHSNRQFYRECDITGTIDFIFGNSAVVFQNCNIKPRQPLPNQFNTITAQGKKDPNQNTGIIIQKSTISAAENLTAPTYLGRPWKEYSTTVIMQSHIGSFLNPVGWKEWVSGVEPASTILYAEYKNTGAGSGVDKRVKWAGYKSSLSDDEAAKFTVQSFIQGSDWLPNTAVMFESTL 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0189 588 CDD PMEI-like_3 78 235 - -
Lele38g0189 588 SMART PMEI_2 71 231 IPR006501 GO:0004857
Lele38g0189 588 SUPERFAMILY Pectin lyase-like 277 584 IPR011050 -
Lele38g0189 588 ProSitePatterns Pectinesterase signature 2. 425 434 IPR033131 -
Lele38g0189 588 Gene3D - 275 588 IPR012334 -
Lele38g0189 588 Gene3D Invertase/pectin methylesterase inhibitor family protein 74 236 IPR035513 -
Lele38g0189 588 FunFam Pectinesterase 72 236 - -
Lele38g0189 588 PANTHER PECTINESTERASE 36 578 - -
Lele38g0189 588 Pfam Plant invertase/pectin methylesterase inhibitor 75 231 IPR006501 GO:0004857
Lele38g0189 588 TIGRFAM PME_inhib: pectinesterase inhibitor domain 67 235 IPR006501 GO:0004857
Lele38g0189 588 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 75 236 IPR035513 -
Lele38g0189 588 FunFam Pectinesterase 275 588 - -
Lele38g0189 588 Pfam Pectinesterase 282 573 IPR000070 GO:0030599|GO:0042545
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0189 Lele-ChrLele38 1510348 1514274 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0189 1 583 Carbohydrate Esterase AT1G53840 60.988 0.0 707