Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0187 ATGAGCAAGTTAAGGCAAGTCTTCGCCGGGATCTCAGACACCGGCAACCGTAACAGAAACAAAAAGCTCTTTCTTGCTCTGTTTTCCACTTTGCTCCTCCTTGGACTCTCCACACTGTACCATGAACTTTGCTTCTCCGCCATCTCCTCCGAGCCTGGATTCACCGAGAAAATCTCTTCCCACCGCGATGTCATCGAATTGTCGATAACCATAACAACCAGGGCCGTTGAGCACAACTATTTCACCGTCGAGAAACTAATCGCCAACAGGAAGGGAAGCCTCACGAAGAGAGAGAAAACCGCTCTTCATGACTGTTTAGAGATGATCGACGAAACACTCGACGAGCTTCACACCGTTTCGGAAGATCTGAAGATCTATCCGAACAACAAAACTCTGTTCCAGCACGCTGACGATCTGAAGACTCTGATAAGTGCCGCCATTACCAACCAGGTCTCGTGTCTCGACGGATTCTCACACGACAGCGCCGATGAGAAAGTGAGGTCAGCTCTAGAGGCAGGGCAGATTCACGTGGAGCACATGTGCAGTAATGAGCTGGCGATGATTAAGAACATGACTGACACAGATGTGGCGAACTATGAGATGAAGATGGGGACCACAAAGAGCAGGAAGCTCATGGCGGCGACATCGGAAGAAGGCGGCGTTCAGTGGCCCGAGTGGATGTCGGTGGCAGACAGGCATTTGTTGCAGGCAACGGGGGTGAGGCCTGACGTGGTGGTAGCGGCGGACGGGAGTGGAAATTTTAGGACGGTGTCGGCGGCAGTGGCTGCGGCACCTGAGAATAGTAATAGGAGATATGTGATTAGGATAAAAGCAGGAGTTTACAGAGAGAATGTGGAAGTTCCGAAGAAGAAGACGAATATCATGTTCTTGGGAGATGGAAGAGGCAACGTACTATCATTACAGGAAGAAGGAATGTTGTTGACGGAAGCACGACGTTCCATTCCGCCACAGTTGTTTGACAAGCTTACCTCTTATCGTCGTCCGCCCGTGGTGGGAGAAAGATTCCTAGCTCGCGACATAACCTTTGAAAACACGGCTGGGCCTTCGAAGCACCAAGCCGTCGCCCTACGAGTTGGTTCCGACTTCGCCGCCTTCTACCAGTGCGACTTCCTCGCCTACCAGGACACCCTCTACGTCCACAACAACCGCCAGTTCTTCATCAACTGCCTCATTTCCGGCACCGTCGACTTCATCTTTGGCAACTCCGCAGCCGTATTCCAAGACTGCGACATCCACGCCCGTCTCCCCGGCTCCGGCCAGAAGAACATGGTCACCGCACAGGGGCGGGTTGACCCGAACCAGAACACCGGCATCGTGATCCAGAAGTGCCGTATAGGAGCAACGAGGGACCTGGAGGCAAGGAAGATGAGCGTCAAGACCTTCCTGGGCCGGCCATGGAAGCAATATTCAAGGACGGTGATAATGCAGTCGACCATAACGGACGTGATTGATCCGGCGGGATGGCATGAGTGGAGTGGGAACTTTGCTTTGAACACTCTGTTCTATGGAGAGTATCAGAATAGAGGCGCCGGCGCCGGGACGGCCAACAGAGTGACGTGGAGGGGGTTCAAGGTTATGACCAGTGCTTCGGAGGCTCAGAGGTTCACTGCTGCCAACTTTATTGGTGGCTCTAACTGGTTGGGTTCCACTGGGTTCCCTTTCTCTTTTGGTCTTTAG 1698 0.5294 MSKLRQVFAGISDTGNRNRNKKLFLALFSTLLLLGLSTLYHELCFSAISSEPGFTEKISSHRDVIELSITITTRAVEHNYFTVEKLIANRKGSLTKREKTALHDCLEMIDETLDELHTVSEDLKIYPNNKTLFQHADDLKTLISAAITNQVSCLDGFSHDSADEKVRSALEAGQIHVEHMCSNELAMIKNMTDTDVANYEMKMGTTKSRKLMAATSEEGGVQWPEWMSVADRHLLQATGVRPDVVVAADGSGNFRTVSAAVAAAPENSNRRYVIRIKAGVYRENVEVPKKKTNIMFLGDGRGNVLSLQEEGMLLTEARRSIPPQLFDKLTSYRRPPVVGERFLARDITFENTAGPSKHQAVALRVGSDFAAFYQCDFLAYQDTLYVHNNRQFFINCLISGTVDFIFGNSAAVFQDCDIHARLPGSGQKNMVTAQGRVDPNQNTGIVIQKCRIGATRDLEARKMSVKTFLGRPWKQYSRTVIMQSTITDVIDPAGWHEWSGNFALNTLFYGEYQNRGAGAGTANRVTWRGFKVMTSASEAQRFTAANFIGGSNWLGSTGFPFSFGL 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0187 565 ProSitePatterns Pectinesterase signature 1. 268 287 IPR018040 -
Lele38g0187 565 TIGRFAM PME_inhib: pectinesterase inhibitor domain 38 191 IPR006501 GO:0004857
Lele38g0187 565 SUPERFAMILY Pectin lyase-like 238 564 IPR011050 -
Lele38g0187 565 Pfam Pectinesterase 243 550 IPR000070 GO:0030599|GO:0042545
Lele38g0187 565 Gene3D - 237 565 IPR012334 -
Lele38g0187 565 SMART PMEI_2 29 187 IPR006501 GO:0004857
Lele38g0187 565 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 37 192 IPR035513 -
Lele38g0187 565 PANTHER PECTINESTERASE 37 555 - -
Lele38g0187 565 CDD PMEI-like_3 40 192 - -
Lele38g0187 565 ProSitePatterns Pectinesterase signature 2. 398 407 IPR033131 -
Lele38g0187 565 Pfam Plant invertase/pectin methylesterase inhibitor 38 187 IPR006501 GO:0004857
Lele38g0187 565 FunFam Pectinesterase 237 565 - -
Lele38g0187 565 FunFam Pectinesterase 31 192 - -
Lele38g0187 565 Gene3D Invertase/pectin methylesterase inhibitor family protein 36 192 IPR035513 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0187 Lele-ChrLele38 1499152 1502132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0187 37 565 Carbohydrate Esterase AT3G14310 67.463 0.0 733