Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0175 ATGTTTGGCAGCTTGAATTCACCGTCCCAGATAGGTTGGCCTGCAAATGGTGATGATCCATGTGGACAGCACTGGAAGGGCATTAGTTGCTCAGGCAACCGAGTCACGGGGATAAATCTTGGTCACAATCAACTCCAGGGTGCACTGAGTGTCGACTTTGAAAAGCTTTCTTCACTCTCCACATTGATCAATGGTTTTGATATTCTCTCATTTCTGAATCAAGGTTGTTATTTGAGTAATAGATGTAAAGACTATGTTTTGGTGCATTTGAGGAACAAGTATTTGCAAAACAATCAGTTTACAGGCACCATTGATGTCTTTGCTGGTCTTCCTCTTGAAAATCTTTATGCCTCTTTGTTTCAGATAACTTGGAATGGAATGAATGTGCAAAACAATCATTTTACAGGTTGGATACCAGAACAGTTGAAAAACATAAACCTACATGGAAGAAACGCCCAATCAGATGATGATACCAGTGACAAAGATAAAAAATCTGGTATAGGAGGTGGTGGCATTGCAGGAATAGTGATCTCCATCTTAATTGTTGACAATCAGCCCTTTGCTCCTCTTGCATCAAATGAAGTGCATGAAATGAAGTCAGTGCAAACATCCTCTGTACCTGACACGAAGACTTTTGTTCCTTCTGCCTCATTCAATCTCAAACCTCCACCTATTGATCGTCATAAATCATTTGATGAAGATGAACTTTCAAAGAAGCCTGATATTGTAAAGAAAACTGTAACAGCTCCTGCAAATGTAAGATTATATTCTATAGCAGATCTACAGATTGCTACCAGCAGCTTCAGTGTGGATCATCTTCTTGGTGAGGGATCTTTTGGACGCGTTTACCGTACTCAATTTGATGATTTAGAGTTTCATAAGAGTGGATCACTACATGACTTCCTTCACTTGCCAGACGAACAAAGCAAACCAGTGATATTCCCGTGTCAAGATTGCTTTGGGAACTGCACGTGCTTTAGAGAAAGTTGTTACTTGATGACGGGATATTGGATTAGAAGATCCTGGTACCTGCATGAAGTTTGTTCCCCATCAGTTGTTCATAAAAATATTAAATCGACCAACATATTGCTCGATACGGAGCTTAATCCTCATCTTTCTGACAGTGGATTGGCAAGATATATTCCAGATGCCGACGAGGTATTAAACCATAATGCTGGATCGGGATACGAGGCACCTGAAGTTGGCTTTTCTGGTCAGTATACTCTAAAGAGTGATGTCTACAGCTTTGGAGTTGTCATGTTGGAGCTTCTTAGTGGACGGAAACCATTTGATAGCTCAAGGCCAAGGTCTGAGCCGTCTCTAGTTCGATGGGCAACTCCACAACTTCATGATATTGATGCATTGCTAAAATGGTTGATCCTGCACTGGAAGGTCAGTAACATATTGCATCCCACATTTCTCCAGTCTGAGTAA 1434 0.41 MFGSLNSPSQIGWPANGDDPCGQHWKGISCSGNRVTGINLGHNQLQGALSVDFEKLSSLSTLINGFDILSFLNQGCYLSNRCKDYVLVHLRNKYLQNNQFTGTIDVFAGLPLENLYASLFQITWNGMNVQNNHFTGWIPEQLKNINLHGRNAQSDDDTSDKDKKSGIGGGGIAGIVISILIVDNQPFAPLASNEVHEMKSVQTSSVPDTKTFVPSASFNLKPPPIDRHKSFDEDELSKKPDIVKKTVTAPANVRLYSIADLQIATSSFSVDHLLGEGSFGRVYRTQFDDLEFHKSGSLHDFLHLPDEQSKPVIFPCQDCFGNCTCFRESCYLMTGYWIRRSWYLHEVCSPSVVHKNIKSTNILLDTELNPHLSDSGLARYIPDADEVLNHNAGSGYEAPEVGFSGQYTLKSDVYSFGVVMLELLSGRKPFDSSRPRSEPSLVRWATPQLHDIDALLKWLILHWKVSNILHPTFLQSE 477
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0175 477 ProSiteProfiles Protein kinase domain profile. 161 477 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0175 477 Pfam Protein kinase domain 343 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0175 477 SUPERFAMILY L domain-like 10 144 - -
Lele38g0175 477 PANTHER LEUCINE RICH REPEAT KINASE 2 33 288 - -
Lele38g0175 477 Gene3D Ribonuclease Inhibitor 3 156 IPR032675 -
Lele38g0175 477 SUPERFAMILY Protein kinase-like (PK-like) 250 454 IPR011009 -
Lele38g0175 477 Gene3D Phosphorylase Kinase; domain 1 230 296 - -
Lele38g0175 477 Gene3D Transferase(Phosphotransferase) domain 1 326 473 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0175 Lele-ChrLele38 1431052 1435935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0175 38 459 Strubbelig Receptor Gene Family AT1G53730 47.477 1.89e-127 385
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-V Lele38g0175 Pkinase 1.1e-16 CL0016