Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0165 ATGGACGCATACTCCTCTGGAGGAGAAGTGGTTGTTAAGACAAGAAAACCATATACAATCACAAAGCAAAGAGAAAGATGGACTGAGGAGGAGCATAACAGGTTTCTAGAAGCCTTAAAGCTCTATGGGAGAGCATGGCAACGCATTGAAGAGCATATAGGAACGAAGACTGCTGTGCAAATCAGGAGCCATGCACAGAAATTCTTTTCAAAGCTGGCGAAAGAGGCTCTTGAAAAGGGTGTTCCGATAGGACAAGCTCTTGACATAGACATCCCTCCTCCACGGCCCAAAAGAAAACCAACTAATCCTTATCCTCGGAAGACCAGTACTGGTTCTCCAGCATCACGTAATGGAGCAAAAGATGGAAAACTAACTTCTGTTTCACCTTCTCAGGGTAAACAAGCACTGGACTTAGAGAAAGAACCGCCTCCCGAGAAACCTGATGGAGATGAAAGACCAATAAATTTTACTGAAAATAAGGATGAGAACTGCTCAAGAGTATTTGCTATTCCACAGGAGGCACCCTGTTCCTCTATATCTTCAGCAAAGAACAGATCAATTTCATTGTCAGTGCCACGGAGAAACTCATGCATTCTAAGGGAGTTCATACCTTCGGTAAGAGTGGGAATTACTCGAGATGAAACAAATGAATCTTCTGTTACTATTGAACTTGAAAATCAGAAGTGCAGGATAGATGAAGGAAAACTAGAACAGACAAAAGCCTCTAAATTGGAGGGTTCTGATGCTTCAGGTGTAAAATTTATTTTGGAGGGTTCTGATGCTTCAGGTGTAAAATTGGTTCAAAGTCAGAAAACAGATGATCTCAATAGTGCATTAACAACAACAGAAGGGATACAAGACAATCAGAATTACCCAAGGCATGGGCACGATCATGACGGGAACCTGGGAACAAATACACAAAACCCTCCCCAAGATATGCTATTACGAGACTCTGTGTTTCAGCCTGTGGGAGAGGTTAGTGGGCAACCTAATATTTTCTCAGATTCAGCTGCATCAAACACGAGCGAAAGTAAGAATAACACGCCTCGATCTTCGATTCATCAATTATTTCCTGCTTATCCTCCCATTCCTCAAGTTCTCTGTAGTCAAGATCATTGCCATTCATTTTTTCAAATGTCCTCCCCATTTTCAAGTCTCATTGTCTCCACCCTAATGCAAAATCCTGCAGCCCATGCTGCAGCTAGTTTTGCTGCTACATTTTGGCCCTATGCAAATGCAGAAGCTTCAGCCGATTCTCCCGCTTCCTCTCAAGGAGGTCTCACATCAAGACAAATTGGCTCCCCTCCGAGTATGGCAGCTATTGCAGCTGCTACGGTGGCTGCTGCAACCGCATGGTGGACCGCCCATGGACTTCTTCCTTTGTGTGCTCCACTCCATTCTGCTTTCTCCTTTCCTCCCGCATCCGCGTTGGTAGTTCCTTCCATGAATACCGGCGAAGCACAAGCAGATAAGAAAGATCAGAAAGAGACTGTGGTTGAGAATCCTCCTCTGCAAGATCAGATACCAAATGGAGAATATTCAGAAGCTCTGCAAGCTCAACATTCAGACTCCAAGTCGCAAGCCGTTTCTTCATCAGATTCCAAGAGGAGAGATGCCAAGTTAACCGCGTCACCTAAGGCTGCTGAACATGACAAGAACGAAGCAATCTCTGAGCACCTTGATTCCAACAAGACCAACGGAAGAAAACCGGTTGACCGTTCTTCATGTGGCTCCAATACAACCTCTAGTAGTGATATAGAGACAGATGCATTAGAGAAGAATGAGAAAGGGAAGGAAGAGTCCTTAACACCAGATGCAAACCAATTAACAACTGAGCCTAGTAATCGCCGTAGTAGGAGTGCTGGCAACCTTCCTGATTCTTGGAAAGAAGTCTCTGAAGAGGGGCGACAGGCCTTTCGGGCTCTCTTCTCCAGAGAGGTTTTGCCGCAAAGCTTTTCACCGCCATACTTGGAACAGGACATTCAGAAAGGCCAAAAAAATGAGGATCACAAGCAGAACATGGTTGAAAAAGACGAAGACCTTGACAGCAACAAATACAGCTCTGATCAGGTAGGGGTAGAGAAGAACATGCCATTTGTAGAAAACACACAGGAAGAGGAGGGACTCCTAACCATAGGGCTGGGACGAGGAAAGCTTAAGGCATGTCGAACCGGGTTTAAACCTTACAAAAGATGTTCAGTGGAGGCAAAGGAAAATAGGGTTGGAACTACCAGTAACCACCAGGGTGAAGAGAAAGGTCCGAAGAGAATACGCTTGGAGGGGGAGGCTTCGACTTGA 2298 0.4513 MDAYSSGGEVVVKTRKPYTITKQRERWTEEEHNRFLEALKLYGRAWQRIEEHIGTKTAVQIRSHAQKFFSKLAKEALEKGVPIGQALDIDIPPPRPKRKPTNPYPRKTSTGSPASRNGAKDGKLTSVSPSQGKQALDLEKEPPPEKPDGDERPINFTENKDENCSRVFAIPQEAPCSSISSAKNRSISLSVPRRNSCILREFIPSVRVGITRDETNESSVTIELENQKCRIDEGKLEQTKASKLEGSDASGVKFILEGSDASGVKLVQSQKTDDLNSALTTTEGIQDNQNYPRHGHDHDGNLGTNTQNPPQDMLLRDSVFQPVGEVSGQPNIFSDSAASNTSESKNNTPRSSIHQLFPAYPPIPQVLCSQDHCHSFFQMSSPFSSLIVSTLMQNPAAHAAASFAATFWPYANAEASADSPASSQGGLTSRQIGSPPSMAAIAAATVAAATAWWTAHGLLPLCAPLHSAFSFPPASALVVPSMNTGEAQADKKDQKETVVENPPLQDQIPNGEYSEALQAQHSDSKSQAVSSSDSKRRDAKLTASPKAAEHDKNEAISEHLDSNKTNGRKPVDRSSCGSNTTSSSDIETDALEKNEKGKEESLTPDANQLTTEPSNRRSRSAGNLPDSWKEVSEEGRQAFRALFSREVLPQSFSPPYLEQDIQKGQKNEDHKQNMVEKDEDLDSNKYSSDQVGVEKNMPFVENTQEEEGLLTIGLGRGKLKACRTGFKPYKRCSVEAKENRVGTTSNHQGEEKGPKRIRLEGEAST 765
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0165 765 SMART sant 23 71 IPR001005 -
Lele38g0165 765 Pfam Myb-like DNA-binding domain 24 67 IPR001005 -
Lele38g0165 765 MobiDBLite consensus disorder prediction 283 312 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 603 622 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 325 355 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 649 700 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 569 587 - -
Lele38g0165 765 CDD SANT 26 69 IPR001005 -
Lele38g0165 765 MobiDBLite consensus disorder prediction 85 160 - -
Lele38g0165 765 FunFam protein REVEILLE 6 isoform X1 26 74 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 138 159 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 588 602 - -
Lele38g0165 765 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 73 IPR017930 -
Lele38g0165 765 MobiDBLite consensus disorder prediction 530 568 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 103 133 - -
Lele38g0165 765 PANTHER SWI/SNF COMPLEX-RELATED 10 647 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 483 632 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 500 529 - -
Lele38g0165 765 ProSiteProfiles Myb-like domain profile. 19 69 IPR001005 -
Lele38g0165 765 Gene3D - 26 73 - -
Lele38g0165 765 SUPERFAMILY Homeodomain-like 18 74 IPR009057 -
Lele38g0165 765 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 22 71 IPR006447 GO:0003677
Lele38g0165 765 MobiDBLite consensus disorder prediction 738 765 - -
Lele38g0165 765 ProSiteProfiles SANT domain profile. 22 73 IPR017884 -
Lele38g0165 765 MobiDBLite consensus disorder prediction 749 765 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 325 354 - -
Lele38g0165 765 MobiDBLite consensus disorder prediction 662 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0165 Lele-ChrLele38 1325654 1333242 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele38g0165 Myb_DNA-binding 2.8e-13 CL0123