Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0162 ATGGGAAAGTGCAGAATAGTGCATGTTGAAGTTCGAAGAAGAGGGAAAGAGAGATGGTGACACATCTCACTCATCCTCCATTCCTTTCTTTTCAATCTTGTATTCTTAATGGCGCATTCACGTGAATCTCATTCCCAGTCCAAGCTTCTCCCCAACCGACAGAACAACCAACCACCGGAAACAGACGTACAAGAAGAAGAGAGCTTCTCTTACGCGATGCAGCTCGCGACTTCTACGGTCATGTCCATGGCGGTGCAAACGGTGGCTGAGCTTGGCGTCTTCGAAATCATTCACAAAGCTGGGCCAAGGGCAAAGCTCTCCGCCGCGGAGATCGCGTCACAACTTCCTTGCAAGAACTCTGAAGCGCCTTCCGTTCTTGATCGTCTCCTCCGGCTTCTGGCGTCTCACTCTGTTCTTCACTGTTCCGTCATCCCTGATGAAACCCAAGGGCCAGGATGTTTCCGGCGGTTGTACAGCCTTGCTCCGGCGGCAAAATTCTTTGTGCGAAATGCTGATGGTGTGTCGTTGGGCCCATTCATTGCGTTGTTTCATGATAAAGTCTTCCTGGAAAGCTGGTCGCAAATGAAAGAGGCAATATTGGAAGGGGGAATCGCATTCAATAGGGTGCATGGATCACATGCATTTGAGTATCCAGGACAAGATTCAAGGTTCAATGATGTTTTTAACAAAGCAATGGTGAATCATACCTCTTTAGCAGTGTCCAAGATTCTTGAAACCTACAAAGGTTTTGAGGACATCACGAGACTCGTCGATGTTGGTGGAGGTTTTGGGGTTACTCTCAACTTGATCACTTCGAAACATCCTCATATTGTAGGAATCAATTTCGATTTGCCTCATGTCCTTCAACATGCTCCTTCTTATCCTGGAGTGGAACACATGGGAGGTGATATGTTTGAAAGTGTGCCTAAGGCCGATGCCGTCTTGATGAAGTGGATACTTCATGATTGGAGTGATGAGTTGTGCTTGAAGCTGTTGAAGAACTGCTACGATGCAATTCCAGAAGATGGGAAGGTGATAGTGGTGGAAGCATTATTTCCCGTTGTACCAGAAACCTCAGCTGCCATGAAGAGCATATCGCAACTTGATGTGCATATGATGACTCAGAACCCAGGCGGCAAGGAGAGAAGCGAGCAAGAGTTCATGGAATTAGCCACGTCAGCTGGGTTTAGTGGTATTAGATATGAATGCTTTGTTCGTAACTACTGGGTTATGGAGTTCTTCAAATAG 1248 0.4688 MGKCRIVHVEVRRRGKERWXHISLILHSFLFNLVFLMAHSRESHSQSKLLPNRQNNQPPETDVQEEESFSYAMQLATSTVMSMAVQTVAELGVFEIIHKAGPRAKLSAAEIASQLPCKNSEAPSVLDRLLRLLASHSVLHCSVIPDETQGPGCFRRLYSLAPAAKFFVRNADGVSLGPFIALFHDKVFLESWSQMKEAILEGGIAFNRVHGSHAFEYPGQDSRFNDVFNKAMVNHTSLAVSKILETYKGFEDITRLVDVGGGFGVTLNLITSKHPHIVGINFDLPHVLQHAPSYPGVEHMGGDMFESVPKADAVLMKWILHDWSDELCLKLLKNCYDAIPEDGKVIVVEALFPVVPETSAAMKSISQLDVHMMTQNPGGKERSEQEFMELATSAGFSGIRYECFVRNYWVMEFFK 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0162 415 Pfam O-methyltransferase domain 192 397 IPR001077 GO:0008171
Lele38g0162 415 MobiDBLite consensus disorder prediction 46 66 - -
Lele38g0162 415 FunFam Caffeic acid O-methyltransferase 168 415 - -
Lele38g0162 415 FunFam Caffeic acid 3-O-methyltransferase 51 167 - -
Lele38g0162 415 Gene3D - 50 167 IPR036388 -
Lele38g0162 415 Pfam Dimerisation domain 83 134 IPR012967 GO:0046983
Lele38g0162 415 Gene3D Vaccinia Virus protein VP39 168 415 IPR029063 -
Lele38g0162 415 PANTHER O-METHYLTRANSFERASE 72 400 IPR016461 GO:0008168
Lele38g0162 415 SUPERFAMILY "Winged helix" DNA-binding domain 64 170 IPR036390 -
Lele38g0162 415 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 172 413 IPR029063 -
Lele38g0162 415 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 73 415 IPR016461 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0162 Lele-ChrLele38 1292781 1296514 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0162 63 415 Monolignol Biosynthesis Gene Families AT5G54160 52.691 3.78e-138 397