Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0160 ATGTTGGTGGTGGTCTTGGTATTTACTCTAAGCCTGATCGTTTCCAAACATCCTCATATTCATGGAATCAATTTCGAGTTGCCTCATATCTTCCAACACGCTCCTTATCCTGGAGTGGAACTTGTTGGGGGAGATATGTTTGAAAGTGTGCCTAAAGGGGATGCCATCTTTGTGAAGGTGAGTAGTTATGTGGAAGTATTGAAGAACTGTTTTAATGCCATTCCAGAAGATGGGAAGGTGATTGTAATGGATGCAGTTTTTCCCATACTACCTGATACTTCTACTGCAACGAAGACCTCTCGACCTACTTATGATGACTCAAAGCCCTGGAGGCAGAGAGAGAAATCACCAAGAGTTCATGGATTTGCCTACTTCATGTGGCTTCAATGCCGTTACATATCAGTGCTTTCTTGGCAACTTCTGGGTTATGGAGTTCTTCAAGTAGATATAGATATATACACATATATAGGAATTTATTATTGTTAG 486 0.4074 MLVVVLVFTLSLIVSKHPHIHGINFELPHIFQHAPYPGVELVGGDMFESVPKGDAIFVKVSSYVEVLKNCFNAIPEDGKVIVMDAVFPILPDTSTATKTSRPTYDDSKPWRQREKSPRVHGFAYFMWLQCRYISVLSWQLLGYGVLQVDIDIYTYIGIYYC 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0160 161 PANTHER O-METHYLTRANSFERASE 10 92 IPR016461 GO:0008168
Lele38g0160 161 Gene3D Vaccinia Virus protein VP39 9 99 IPR029063 -
Lele38g0160 161 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 10 96 IPR029063 -
Lele38g0160 161 Pfam O-methyltransferase domain 12 99 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0160 Lele-ChrLele38 1282058 1283011 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0160 9 98 Monolignol Biosynthesis Gene Families AT5G54160 54.082 1.94e-29 108