Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0159 ATGTCAATCATCCTCCTTTCCTTTCTTTTCAATCTTGTATTCTTAATGGCGCACTCACGTGAATCTCATTCCCAGTCCAAGCTTCTCCACAACCGACAGAACAGCCAACCACCGGAAACAGACGAACAAGAAGAAGAGAGCTTCTCTTACGCGATGCAGCTCGCGACTTCTACGGTCATGTCCATGGCGGTGCAAACGGTGGCTGAGCTTGGCGTCTTCGACATCATTCACAAAGCTGGGCCAAGGGCAAAGCTCTCCGCCGCGGAGATCGCGTCACAACTTCCTTGCAAGAACCCTGAAGCGCCTTCCGTTCTTGATCGTCTCCTCCGGCTTCTGGCGTCTCACTCTGTTCTTCACTGTTCCGTCATCCCTGATGAGACCCCAGGGCCAGGATGTTTCCTGCGGTTGTATAGCCTTGCTCCGGCGGCAAAATTCTTTGTGCGAAATGCTGATGGTGTCTCGTTGGGCCCATTCATTGCGTTGGTTCAGGATAAAGTCTTGCTGGAAAGCTGGTCGCAAATGAAAGAGGCAATATTGGAAGGGGGAATCGCATTCAATAGGGTGCATGGATCGCATGCATTTGAGTATCCAGGACAAGATTCAAGGTACAATGATGTTTTTAACAAAGCAATGGTGAATCATACCTCTTTAGCAGTGTCCAAGATTCTTGAAACCTACAAAGGTTTTGAGGACATCACAAGACTCGTCGACGTTGGTGGAGGTTTTGGGGTTACTCTCAACTTGATCACTTCGAAGCATCCTCATATTCTAGGAATCAATTTCGATTTGCCTCATGTCCTTCAACATGCTCCTTCTTATCCTAGAGTGGAACACGTGGGAGGTGATATGTTTGAAAGTGTGCCTAAGGCCGATGCCGTCTTGATGAAGTGGATACTTCATGATTGGAGTGATGAGTTGTGCTTGAAGCTGTTGAAGAACTGCTACGAAGCAATTCCAGAAGATGGGAAGGTGATAGTGGTGGAAGCGTTATTCCCCATTGTACCAGAAACCTCAGCTGCCATGAAGAGCATATCGCAAATTGATGTGCATATGATGACTCAGAGCCCAGGCGGCAAGGAGAGAAGCGAGCAAGAGTTCATGGAATTAGCCACGTCAGCTGGGTTTAGTAGTATTAGATATGAATGCTTTGTTCGTAACTACTGGGTTATGGAGTTCTTCAAATAG 1185 0.4751 MSIILLSFLFNLVFLMAHSRESHSQSKLLHNRQNSQPPETDEQEEESFSYAMQLATSTVMSMAVQTVAELGVFDIIHKAGPRAKLSAAEIASQLPCKNPEAPSVLDRLLRLLASHSVLHCSVIPDETPGPGCFLRLYSLAPAAKFFVRNADGVSLGPFIALVQDKVLLESWSQMKEAILEGGIAFNRVHGSHAFEYPGQDSRYNDVFNKAMVNHTSLAVSKILETYKGFEDITRLVDVGGGFGVTLNLITSKHPHILGINFDLPHVLQHAPSYPRVEHVGGDMFESVPKADAVLMKWILHDWSDELCLKLLKNCYEAIPEDGKVIVVEALFPIVPETSAAMKSISQIDVHMMTQSPGGKERSEQEFMELATSAGFSSIRYECFVRNYWVMEFFK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0159 394 Pfam Dimerisation domain 62 113 IPR012967 GO:0046983
Lele38g0159 394 MobiDBLite consensus disorder prediction 25 47 - -
Lele38g0159 394 SUPERFAMILY "Winged helix" DNA-binding domain 42 149 IPR036390 -
Lele38g0159 394 Gene3D - 29 146 IPR036388 -
Lele38g0159 394 Pfam O-methyltransferase domain 171 376 IPR001077 GO:0008171
Lele38g0159 394 Gene3D Vaccinia Virus protein VP39 147 394 IPR029063 -
Lele38g0159 394 PIRSF O-mtase 29 394 IPR016461 GO:0008168
Lele38g0159 394 PANTHER O-METHYLTRANSFERASE 51 379 IPR016461 GO:0008168
Lele38g0159 394 FunFam Caffeic acid O-methyltransferase 147 394 - -
Lele38g0159 394 FunFam Caffeic acid 3-O-methyltransferase 30 146 - -
Lele38g0159 394 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 52 394 IPR016461 GO:0008168
Lele38g0159 394 CDD AdoMet_MTases 234 327 - -
Lele38g0159 394 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 151 392 IPR029063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0159 Lele-ChrLele38 1271555 1274269 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0159 44 394 Monolignol Biosynthesis Gene Families AT5G54160 52.707 2.37e-137 395