Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0157 ATGGCTCAATCTCAACAATCTCATTCTCAGCCCAAGCCTCTTCACAACGAACAGAGCAGCGATCACCTACAGAAGGAGCAAGCACCAAAAGTAGATGACGTTGAAGAAGAGAGCTTCTCCTACGCCATGCAGCTCGCGACTTCTACGGTAATTTCCATGACGATGCAAACAGCGGTGGAGCTCGGCATATTCGACGTTATTCATAGAGCTGGTAACAACGCCAGGCTCTCTGCCGCCGAGATCGCGACGGAGCTTTCTTGCAAGAACTCTGAAGCGCCTTCCGCGCTCGATCGTCTCCTCCGGCTTCTAGCGTCTCACTCTGTTCTTTCCTGTTCCGTTGTCGCCGACGAGGATCTAGGGCCGGGGTGTTTCCGACGATTGTACGACCTCACTCCGGTGGCCAAATTCTTTGTGAGGAATGCGGATGGAGTGTCGTTGGGCCCTCTCATGGCGTTGATTCAAGATAAGGTCTTCCTTGATAGCTGGCCACAATTGAAGGATGCAATATGTGAAGGAGGTATAGCGTTCAATAGGGTGCATGGCTCACATTCTTTTGAGTGTATGAGACTGGATTCGAGATTCAACGATGTTTTCAACAAGGCAATGATGAATCATACCCCTTTAGTTTTGACTAAGATTCTTGAATCCTACAAAGGTTTTAAGGATGTCACTACACTCGTTGACGTTGGTGGTGGTCTTGGGATTACTCTCAGCTTTATCACCTCCAATTATCCTCATATTCACGGAATCAATTTCGACTTGCCTCATGTCATCCAACACGCTCCTCCTTATCCTAGAGTGGAACACGTGGGAGGAGATATGTTCGAAAGTGTGCCTCAAGGAGATGCCATCTTTATGAAGTGGATACTTCATGATTGGAGTGATGAATGGTGCCTGAAGCTGTTCAAGAACTGTCATGATGCGATTCCTGAAGATGGAAAAGTGATTGTGGTGGACGCAGTTTTGCCAATTGTTCCAGAGATTTCTGCTGCTGCGAAGACCACCTCCCAACTTGATCTGATTATGATGACTCAGAGCTCAGGTGGCAAGGAGAGAAGTGAGCAAGAATTCATGGAGTTGGCTACATCAGCTGGGTTTAGAGGCATTAGATTTGATTGTTTTGTTCGTAACTGTTGGGTTATGGAGTTCTTCAAATAG 1158 0.4724 MAQSQQSHSQPKPLHNEQSSDHLQKEQAPKVDDVEEESFSYAMQLATSTVISMTMQTAVELGIFDVIHRAGNNARLSAAEIATELSCKNSEAPSALDRLLRLLASHSVLSCSVVADEDLGPGCFRRLYDLTPVAKFFVRNADGVSLGPLMALIQDKVFLDSWPQLKDAICEGGIAFNRVHGSHSFECMRLDSRFNDVFNKAMMNHTPLVLTKILESYKGFKDVTTLVDVGGGLGITLSFITSNYPHIHGINFDLPHVIQHAPPYPRVEHVGGDMFESVPQGDAIFMKWILHDWSDEWCLKLFKNCHDAIPEDGKVIVVDAVLPIVPEISAAAKTTSQLDLIMMTQSSGGKERSEQEFMELATSAGFRGIRFDCFVRNCWVMEFFK 385
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0157 385 FunFam Caffeic acid O-methyltransferase 138 385 - -
Lele38g0157 385 Pfam O-methyltransferase domain 162 367 IPR001077 GO:0008171
Lele38g0157 385 CDD AdoMet_MTases 225 322 - -
Lele38g0157 385 PIRSF O-mtase 20 385 IPR016461 GO:0008168
Lele38g0157 385 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 142 383 IPR029063 -
Lele38g0157 385 Gene3D - 18 137 IPR036388 -
Lele38g0157 385 Pfam Dimerisation domain 53 104 IPR012967 GO:0046983
Lele38g0157 385 PANTHER O-METHYLTRANSFERASE 42 371 IPR016461 GO:0008168
Lele38g0157 385 Gene3D Vaccinia Virus protein VP39 138 385 IPR029063 -
Lele38g0157 385 MobiDBLite consensus disorder prediction 1 17 - -
Lele38g0157 385 SUPERFAMILY "Winged helix" DNA-binding domain 34 140 IPR036390 -
Lele38g0157 385 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 43 385 IPR016461 GO:0008168
Lele38g0157 385 FunFam Caffeic acid 3-O-methyltransferase 20 137 - -
Lele38g0157 385 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0157 Lele-ChrLele38 1262071 1263788 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0157 27 385 Monolignol Biosynthesis Gene Families AT5G54160 49.861 8.42e-131 378