Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0155 ATGGAGAGGATTCAAGGACCCATCAATTCCTGTTGTTTCTTCGGTGAGCATTTGGAAGTAAATTGTTTCGAACAAGGCTTCATCAACACAGAGGATGAGGAACAAGTTTATATATCGAGCTTAGAGGATAAGAAGGTGCCATTTCTGCAGATGTTGCAGCGTGTGGAATCTCCACCACAGTTTTTCCCATTATCTGAGGAAAAATTACAAACACTCTTGAGGCTACAGAACATGAAAAAACAACCACCACCATGGGAAGAAGAAGCTCACATACCCAGATTCGAGACCCAAATCCAAGCTAATAAAGAACTTGAAAGCTGTATCACACAAGACGTTGTCGAGATCCACTCGCCGGTGAAATCCGAAACCAACGAAGAATCTCATCTTCTTCTTCCTCGTCCAGCCACAATGGTTCAGAAAGGACCCGCCAATATTCAACCCGAAAATTCTAGCAGAGACCCCAGACGGAGAAAGCGGAAGAGAACGAGACCAGTCAAGAACAAGGAAGAAGTGGAGAACCAGAGAATGACCCACATTGCCGTCGAACGGAACCGGCGACGCCAGATGAACGACCATCTCAGTGTTCTAAGGACCCTCATGCCTCCTTCCTATATTCAAAGGGGTGACCAAGCGTCTATCATCGGAGGTGCCATTGATTTCGTGAAGGAATTGGAACAACTACTTCAAACTCTGGAGTCACAGAAGAGGATTAGAAAGAACGAAGAGATTGGATCTTGTTATGGAGGAGAGAGTCTGAAAGCATCATCCCTGGGCTACGAAGGAGAAGGAGAATTAGAGTGTAGTGGGGAAGAAGAAGAGGTGAAGGAAGCAGAGGTAATAGAGGTGATGGTGATTCAGACGCATGTGAACTTGAAGATTCGATGCAGAAGAAGACAGGGACAATTGGTGAGAGCCATTGTTGGGTTGGAAGAACTTAGGCTCAGCGTTCTGCATCTCAACATCACCTCGTCGCTGGGATCGGTACTATACTGTTTCAATCTCAAGATTGAAGAAGAGTGTAAGGTAGGGTCCGCGAATGAAATAGCAGAAGCGGTTCGTAATATATTCAGAGCGATGGATAATTAG 1086 0.4549 MERIQGPINSCCFFGEHLEVNCFEQGFINTEDEEQVYISSLEDKKVPFLQMLQRVESPPQFFPLSEEKLQTLLRLQNMKKQPPPWEEEAHIPRFETQIQANKELESCITQDVVEIHSPVKSETNEESHLLLPRPATMVQKGPANIQPENSSRDPRRRKRKRTRPVKNKEEVENQRMTHIAVERNRRRQMNDHLSVLRTLMPPSYIQRGDQASIIGGAIDFVKELEQLLQTLESQKRIRKNEEIGSCYGGESLKASSLGYEGEGELECSGEEEEVKEAEVIEVMVIQTHVNLKIRCRRRQGQLVRAIVGLEELRLSVLHLNITSSLGSVLYCFNLKIEEECKVGSANEIAEAVRNIFRAMDN 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0155 361 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 173 224 IPR011598 GO:0046983
Lele38g0155 361 CDD bHLH_AtFAMA_like 176 245 - -
Lele38g0155 361 PANTHER MAX DIMERIZATION, MAD 117 357 - -
Lele38g0155 361 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 173 239 IPR036638 GO:0046983
Lele38g0155 361 Coils Coil 221 241 - -
Lele38g0155 361 FunFam Basic helix-loop-helix transcription factor 164 239 - -
Lele38g0155 361 Pfam Helix-loop-helix DNA-binding domain 174 225 IPR011598 GO:0046983
Lele38g0155 361 Gene3D - 164 245 IPR036638 GO:0046983
Lele38g0155 361 MobiDBLite consensus disorder prediction 136 171 - -
Lele38g0155 361 SMART finulus 179 230 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0155 Lele-ChrLele38 1239816 1242511 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0155 51 358 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G46810 41.690 2.62e-70 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele38g0155 HLH 2.7e-10 No_clan