Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0142 ATGGGGAAGAAGGGAGGTAGCTCTTGGTTGAGTGCCGTGAAAAGGGCATTCAGATCTCCAACCAAAGACCAAATCGACGAAGACAAGAAAAGAGAAAAACGAAGATGGATCTTCAGAAAACCGGTGATAAACCACGAATCACCGAGTTCCCAACAAACCCCAGCAGAGCAGAAGCCTGATGCAGCCGAGGCAGCCACAGATCAAAAGCACGCTCTGGCTGTGGCGGTAGCCGCCGCTGAGGCCGCCATGACCACAGCTCAGGTGGCTGTGGAAGTGGCCAGACTTACCAGACCACCCAATCATACTAAAGAACACTATGCTGCTATTGTGATTCAAACAGCTTTCAGAGGATACATAGCAAGAAGGGCTCTTCGGGCGCTGAAGGGGCTGGTGAAATTGCAAGCGTTAGTAAGGGGTCACAATGTTCGGAAGCAAGCGAAGATGACACTACGGTGCATGCAGGCTCTGGTGAGAGTCCAATCTCGGGTGGTTGATCGGCGCGTGAGGCTGTCACACGACGGAAGCAGTAGAAAATCCACGTTCAGTGACTCCAATAGCCTCTTGGAATCGCGTTATCTTCAGGACATCTCAGACAGAAGATCAATGAAGTCAAGAGAAGGAAGCAGTGTTGCAGACGATTGGGATGAAAGGGCACACACAAGTGAAGAAATTAAAGCAATGTTGAGGCAGAGGAAGGATGCAGCTTTGAAACGAGACAAGCCCTTGTCTCAAGTTTTCTCTCAACAGGTCTGGAGAAGCGGAAGAAGGCCGTCGATTGGGAATGAAGAGGAACTGGAGGAGAGGCTGGCGTGGCTAGAGCGGTGGATGGCGGTGAAGCCATGGGAGAGAAGGGGAAGAGCTTCAGTTGATCAAAGAGAAACGATCAAGACGGTAGAAATGGACACAAGTCGTCCTTGCACATCATATGTAGGATCTAACTACAGAAGATCACACCCAAATTATCAATATAACCCACACCCACACCAACCTCAAAGACACTCTGTAGCTTCTCCATTCCACAGATCATCGTCATCATCTCTTCACCATTCCCCCGCAACCCCATCTCCCGCAAAATCCAGGCCGGTCCAGGTCAGGTCGGCGAGCCCTCGCTGTGGAAGAGAAGATAGAAGCTTCCATAGCACATCCCAAACACCAAGCTTAAGGTCCAACTATCATTACACAGGAAGATGTGGAAGCAGCAGCAACAATGGTGGTGGTGGTTCATTGCCTAATTACATGGCGGCGACCGAGTCTGCGAAGGCGAGGATCCGGTCTCTGAGCGCGCCAAGGCAGAGGCCTTGGACATCAGAGAGAGACAGATCAGTCGGATCGGCAAAGAAGAGGCTTTCTTTCCCTGCTCATCCTGGAGATGCGTATGGGTATGGTCATGGCGGTTATAGCAGTTATGCGCATAGTCTAAGGAGTCCAAGCTTCAAGAGTGTGTGTGGATCACAGTATGGCATGGATCAAGCTTCCATATATTCTTCTTGCTGCCGGGAGAGCCTTAATGCTGCTGCTGCTGAGATGTCTCCTTCTTCAACTGGTGATCTTAGAAGTGAGTCGGATGTGGTGACCCAGCTGAAGAACCAAGTTGTGTTGTTGATGTTGAAACTTGGAAAGTGTTTTGACATTATAACTGAGCTATAA 1647 0.5003 MGKKGGSSWLSAVKRAFRSPTKDQIDEDKKREKRRWIFRKPVINHESPSSQQTPAEQKPDAAEAATDQKHALAVAVAAAEAAMTTAQVAVEVARLTRPPNHTKEHYAAIVIQTAFRGYIARRALRALKGLVKLQALVRGHNVRKQAKMTLRCMQALVRVQSRVVDRRVRLSHDGSSRKSTFSDSNSLLESRYLQDISDRRSMKSREGSSVADDWDERAHTSEEIKAMLRQRKDAALKRDKPLSQVFSQQVWRSGRRPSIGNEEELEERLAWLERWMAVKPWERRGRASVDQRETIKTVEMDTSRPCTSYVGSNYRRSHPNYQYNPHPHQPQRHSVASPFHRSSSSSLHHSPATPSPAKSRPVQVRSASPRCGREDRSFHSTSQTPSLRSNYHYTGRCGSSSNNGGGGSLPNYMAATESAKARIRSLSAPRQRPWTSERDRSVGSAKKRLSFPAHPGDAYGYGHGGYSSYAHSLRSPSFKSVCGSQYGMDQASIYSSCCRESLNAAAAEMSPSSTGDLRSESDVVTQLKNQVVLLMLKLGKCFDIITEL 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0142 548 Pfam IQ calmodulin-binding motif 131 147 IPR000048 GO:0005515
Lele38g0142 548 Pfam IQ calmodulin-binding motif 107 125 IPR000048 GO:0005515
Lele38g0142 548 SMART iq_5 103 125 IPR000048 GO:0005515
Lele38g0142 548 SMART iq_5 126 147 IPR000048 GO:0005515
Lele38g0142 548 Pfam Protein of unknown function (DUF4005) 368 462 IPR025064 -
Lele38g0142 548 PANTHER IQ-DOMAIN 5-RELATED 1 453 - -
Lele38g0142 548 MobiDBLite consensus disorder prediction 423 449 - -
Lele38g0142 548 MobiDBLite consensus disorder prediction 304 395 - -
Lele38g0142 548 MobiDBLite consensus disorder prediction 19 34 - -
Lele38g0142 548 FunFam IQ-domain 11 103 154 - -
Lele38g0142 548 ProSiteProfiles IQ motif profile. 104 132 IPR000048 GO:0005515
Lele38g0142 548 Gene3D - 101 156 - -
Lele38g0142 548 MobiDBLite consensus disorder prediction 1 66 - -
Lele38g0142 548 MobiDBLite consensus disorder prediction 304 362 - -
Lele38g0142 548 ProSiteProfiles IQ motif profile. 128 155 IPR000048 GO:0005515
Lele38g0142 548 MobiDBLite consensus disorder prediction 378 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0142 Lele-ChrLele38 1133784 1136735 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0142 9 518 IQD Protein Family AT4G00820 54.000 2.14e-160 466