Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Lele38g0139 | ATGGTTAAGGCTCTTTATGTGAAAAACATACCTGAGAATACTACTACTGAACAACTGAAGGAACTGTTCTGTCGACACGGAGAAGTAACAAAGGTGGTCATGCCTCCCGGTAAAGCTGGAGGCAAACGTGACTTTGGTTTCATTCATTATGCAGAGAGGTCAAGTGCATTAAAGGCAGTAAAAGAGACAGAAAAATATGAAATAGACGGCCAAGCGTTGGAAGTTGTTCTAGCAAAGCCTCAAACTGAGAAGAAAACCGATGGGGGTTATACCTACAATCCTGGGCTTCATCCACATCCTGGGTATGGTGGTTTCTCAGGAAATCTATATGGTTCTTCTGTGCGGCCTGGATATGGCGGCGTTACCAGTGGTTATCAACAACCGGTGATATATGGTAGGGGTCCAATGCCAGCAGGAATGCAGATGGTTCCAATGGTATTACCCGATGGTCGCATCGGCTATGTCCTTCAACAGCCTGGCGCGCAGATTTCGGCTCCCCGACCCCAGAGGAACAATGGTCGGAGTAGTCAGCCGGGGCGAGCGGGAAGCAGCGGCAATGATGAGGGCAATCGCAGTAGAAGGTATCGACCTTATTAA | 597 | 0.4841 | MVKALYVKNIPENTTTEQLKELFCRHGEVTKVVMPPGKAGGKRDFGFIHYAERSSALKAVKETEKYEIDGQALEVVLAKPQTEKKTDGGYTYNPGLHPHPGYGGFSGNLYGSSVRPGYGGVTSGYQQPVIYGRGPMPAGMQMVPMVLPDGRIGYVLQQPGAQISAPRPQRNNGRSSQPGRAGSSGNDEGNRSRRYRPY | 198 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Lele38g0139 | 198 | MobiDBLite | consensus disorder prediction | 157 | 198 | - | - | |
Lele38g0139 | 198 | ProSiteProfiles | Eukaryotic RNA Recognition Motif (RRM) profile. | 3 | 80 | IPR000504 | GO:0003723 | |
Lele38g0139 | 198 | PANTHER | HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED | 4 | 168 | - | - | |
Lele38g0139 | 198 | CDD | RRM3_hnRNPR_like | 2 | 80 | - | - | |
Lele38g0139 | 198 | Gene3D | - | 2 | 127 | IPR012677 | - | |
Lele38g0139 | 198 | SMART | rrm1_1 | 4 | 76 | IPR000504 | GO:0003723 | |
Lele38g0139 | 198 | MobiDBLite | consensus disorder prediction | 162 | 186 | - | - | |
Lele38g0139 | 198 | SUPERFAMILY | RNA-binding domain, RBD | 4 | 105 | IPR035979 | GO:0003676 | |
Lele38g0139 | 198 | Pfam | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) | 5 | 73 | IPR000504 | GO:0003723 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Lele38g0139 | Lele-ChrLele38 | 1115416 | 1117224 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Lele38g0139 | 5 | 168 | Eukaryotic Initiation Factors Gene Family | AT2G23350 | 26.816 | 4.15e-10 | 56.6 |