Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0136 ATGCACCTTAATTATCATGGACTTGTTATTTTTCGCTTTACATTCCACCAGAGACAAAATCATCAGTTTTTGAGCTTCGTTTCAGCTCCAAAGTATCCCCTACATTCAAACCCATATCAGAAAAATCAGAACTTGAAGGCAAAAATGAGCATGATTGCCGCGAAATCTCGGACCCGCGTGGGAAAATACGAGCTGGGCAAAACCATTGGCGAGGGTAGCTTCGCTAAGGTGAAGTTTGCGAGAAACGTTGAGACAAGCCAACACGTCGCCATCAAAATCCTCGACCGTAACCATGTTCTTCGACATAAGATGGTGGAACAGCTGAAGAGAGAAATTTCCACGATGAAGCTGATCAAACATCCGAATGTTGTTAACATATTTGAGGTGATGGCAAGCAAAACGAAGATTTACATTGTCCTTGAGTTTGTTGGTGGGGGGGAACTATTTGACAAAATAGCTAATGATGGGAGACTTAAGGAGAATGAAGCAAGGCAATATTTCCAACAACTTATTAATGCTGTTGATTACTGCCATAGTAGAGGCGTGTTTCACAGAGACTTGAAGCCTGAGAATCTTCTTCTGGACTCAAATGGTATTCTTAAAGTTTCAGATTTTGGACTGAGTACATACTCACAGCAAGATGATGCACTGCTACGCACTGCCTGTGGAACCCCTAATTATGTTGCTCCTGAGGTGCTTAATGATAAAGGCTATGATGGTTCGGCAGCTGATATTTGGTCATGTGGCGTCATTCTCTTTGTTCTGATGGCTGGATACTTACCTTTTGATGAGCCAAATCAAATGGCTTTGTATAAGAAAATTAGCAAGGCTGAATTCTCATACCCATCATGGTTTACACCAGATGCAAAGAAACTGCTGCATCGTATTCTTGATCCAAACCCTCTCACACGGATAAAAATTCAGGAACTCTTGGAAGATAAATGGTTCAAGGAAGGATACAAACCACCATGTTTTGAAGAGGAAGAGGGTATAAATGTAGATGATGTAGCTGCGGCCTTCAATGATTCTAAGGAAAACCTTGTGACAGAAAGGAAAGAAAAACCCGTCTCCATGAATGCTTTTGAGCTCATTTCGAGGTCACAGAGTTTCAATCTTGACAGTTTGTTTGAGAAAGAGATGGGTATAGTGAAGCGAGAAACAAGATTTACTTCTCAGCGCCCTGCACATGAAATTATATCTAAAATTGAGGAAGCTGCCAAACCCTTGGGATTTAATGTTCACAGGCGAAACTACAAGATGAAACTTCAAGGTGACAAGAGTGGAAGGAAGGGACACCTCTCTGTGGCCACTGAGGTTTTTGAAGTGGCTCCCTCATTGCACATGGTGGAGTTGCGGAAGACAGGGGGTGACACGCTGGAGTTTCACAAGTTCTACAAGAACTTCTCATCGGGTTTGCAAGATGTAAAAAATTTGAACAATCAAGGTAGTGAGTGTGTGCACTTAATGTGGGTCACTGAATCGCACGAGTTTTTGGGCAATGCCAGAGCAAGTATCAGTTGGAATTGGACTAAGTGTTGA 1539 0.4224 MHLNYHGLVIFRFTFHQRQNHQFLSFVSAPKYPLHSNPYQKNQNLKAKMSMIAAKSRTRVGKYELGKTIGEGSFAKVKFARNVETSQHVAIKILDRNHVLRHKMVEQLKREISTMKLIKHPNVVNIFEVMASKTKIYIVLEFVGGGELFDKIANDGRLKENEARQYFQQLINAVDYCHSRGVFHRDLKPENLLLDSNGILKVSDFGLSTYSQQDDALLRTACGTPNYVAPEVLNDKGYDGSAADIWSCGVILFVLMAGYLPFDEPNQMALYKKISKAEFSYPSWFTPDAKKLLHRILDPNPLTRIKIQELLEDKWFKEGYKPPCFEEEEGINVDDVAAAFNDSKENLVTERKEKPVSMNAFELISRSQSFNLDSLFEKEMGIVKRETRFTSQRPAHEIISKIEEAAKPLGFNVHRRNYKMKLQGDKSGRKGHLSVATEVFEVAPSLHMVELRKTGGDTLEFHKFYKNFSSGLQDVKNLNNQGSECVHLMWVTESHEFLGNARASISWNWTKC 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0136 512 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 58 467 - -
Lele38g0136 512 CDD CIPK_C 359 472 - -
Lele38g0136 512 SMART serkin_6 63 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0136 512 Pfam NAF domain 355 414 IPR004041 GO:0007165
Lele38g0136 512 ProSitePatterns Serine/Threonine protein kinases active-site signature. 182 194 IPR008271 GO:0004672|GO:0006468
Lele38g0136 512 FunFam Non-specific serine/threonine protein kinase 54 142 - -
Lele38g0136 512 Gene3D Kinase associated domain 1, KA1 352 476 - -
Lele38g0136 512 Gene3D Phosphorylase Kinase; domain 1 52 142 - -
Lele38g0136 512 ProSitePatterns Protein kinases ATP-binding region signature. 69 92 IPR017441 GO:0005524
Lele38g0136 512 FunFam Non-specific serine/threonine protein kinase 56 356 - -
Lele38g0136 512 ProSiteProfiles Protein kinase domain profile. 63 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0136 512 Pfam Protein kinase domain 63 316 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0136 512 Gene3D Transferase(Phosphotransferase) domain 1 143 341 - -
Lele38g0136 512 SUPERFAMILY Protein kinase-like (PK-like) 60 330 IPR011009 -
Lele38g0136 512 FunFam Non-specific serine/threonine protein kinase 352 477 - -
Lele38g0136 512 ProSiteProfiles NAF domain profile. 353 377 IPR018451 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0136 Lele-ChrLele38 1097206 1104542 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0136 56 475 CBL-interacting serine-threonine protein kinases AT1G01140 76.815 0.0 686
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Lele38g0136 Pkinase 2.7e-72 CL0016