Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0132 ATGGACGATCTCATCCTCTCCCCTTCTTCCCCTCCCTCCCTCCTCTCCTTCGCTCACTCTCCGCTGCCTCCTCCTCCTTCTCCTTCCTCCTCTCCTCTTCAAAACAAGCTCCAATTCTTACTTCAGTCCCAGCCTCGCTCCTGGCTCTACGCCATTTTCTGGCAAACCTCCCACGACGATAGCAACCGCCTCCGCTTGTCCTGGGCCCATGGTCACTTCCATGGCTCCGATCATCGTCCCCGTCCCAACAACTTCATCAAAGGTCTTGAATCTTTCGTCGACGACAACCTAAATGACGCTGAGTGGTTCTATGTCATGTCCTTGACTCGCACTTTCTCCCTCGCTCCTGATTCCTCCTCCTCCTCCCTCCCCGCCAAGGCTTTCTTCTCCGCTTCTCCCCTCTGGTTGAATATCATCCACCACGAGCTTCAGTTTCAGTGTTGCGACAGAGCCAAAGAAGCTTCCCTCCATGGGATCCGAACCCTGATCTATGTTCCCACCACTCACGGAGTTCTCGAAATGGGTTCCTCTGAGATCATCCCCAAGAGCTCCAGTCTCATCCAGCAACTTAAATCTCTGTACGGCTCCTCGGATCTCACCGCCATCATCTCACCCTCTAATAAGCGACCCGAACCGGTTGATTTCTTGGACGTCGACGAGACCATCTCTTTTGCCGACATAGGCATTATCCCCGGCGCACCGGAAGTAGAAGATGAAAAGGCACCGGTCAGCTCCTGTAGTAAATCCCTAAAGAAAGATCCCCTTCTGCACCTCAGGTCGTATGTGGATTCAGAGCATTCACATTCGGATTCCGACGGTCCGATAATGGAGAAGACACTGCCCAAGAAGAGAGGAAGAAAGCCCGGACTGGGTCGCGAGACGCCGCTAAACCACGTGGAAGCCGAGCGGCAACGCCGGGAAAAGCTGAACCACCGGTTCTACGCGCTACGCGCGGTGGTCCCGCATGTGACGAGGATGGACAAGGCTTCACTGTTATTGGACGCCGTCTCTTACATCAACGAGCTCAAAGCCAAGATCGAGAAACTGGAGTCACAGCTTCAGAGGGAGCCCAACTATATGAACAGTTGCAGGAAGGTGAAGCTGGAAGACACGATGGAATCGACGGTGGAGCAGGGCGGCCCCAACGGGCGAGGGTTCAGGCTGGGGCTGGGGCTTGGCGGGCTGGAGGTCGACGTCAGAATCATAGGACCGGACGCGATGGTCAGAGTTCAGTCTGAGAACAGGAACCATCCCGGAGCAAGGCTGATGGACGCGCTGCGAGACTTGGAGCTCAGGGTGCACCAGGCGAGCATGTCATGCGTCAACGAAGTCATGCTTCAAGACGTCGTCGTTAAGATCCCTCAAGGCCTGAAAAGCGACGAAAGCTTGATTAAATCTGCTATTCTCAGGAGACTGGATCAGTAG 1425 0.5495 MDDLILSPSSPPSLLSFAHSPLPPPPSPSSSPLQNKLQFLLQSQPRSWLYAIFWQTSHDDSNRLRLSWAHGHFHGSDHRPRPNNFIKGLESFVDDNLNDAEWFYVMSLTRTFSLAPDSSSSSLPAKAFFSASPLWLNIIHHELQFQCCDRAKEASLHGIRTLIYVPTTHGVLEMGSSEIIPKSSSLIQQLKSLYGSSDLTAIISPSNKRPEPVDFLDVDETISFADIGIIPGAPEVEDEKAPVSSCSKSLKKDPLLHLRSYVDSEHSHSDSDGPIMEKTLPKKRGRKPGLGRETPLNHVEAERQRREKLNHRFYALRAVVPHVTRMDKASLLLDAVSYINELKAKIEKLESQLQREPNYMNSCRKVKLEDTMESTVEQGGPNGRGFRLGLGLGGLEVDVRIIGPDAMVRVQSENRNHPGARLMDALRDLELRVHQASMSCVNEVMLQDVVVKIPQGLKSDESLIKSAILRRLDQ 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0132 474 PANTHER MYC 27 471 IPR045084 GO:0003700|GO:0006355
Lele38g0132 474 Gene3D - 291 357 IPR036638 GO:0046983
Lele38g0132 474 MobiDBLite consensus disorder prediction 1 33 - -
Lele38g0132 474 MobiDBLite consensus disorder prediction 263 304 - -
Lele38g0132 474 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 33 193 IPR025610 -
Lele38g0132 474 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 294 360 IPR036638 GO:0046983
Lele38g0132 474 SMART finulus 299 348 IPR011598 GO:0046983
Lele38g0132 474 Coils Coil 332 359 - -
Lele38g0132 474 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 293 342 IPR011598 GO:0046983
Lele38g0132 474 Pfam Helix-loop-helix DNA-binding domain 297 342 IPR011598 GO:0046983
Lele38g0132 474 MobiDBLite consensus disorder prediction 17 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0132 Lele-ChrLele38 1065583 1067007 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0132 33 453 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G17880 33.271 3.25e-85 271
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele38g0132 bHLH-MYC_N 2.5e-35 CL0161