Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0124 ATGATTCTCCACAACCCATTTTTCCTATTCATTCTCATCATGTTTTTGTTGTATATTACTCGTGTGGCTCTGTTCAAAACTGGATTGATGTACACCGTGAAGAAATGTTGGAGAATCATTGAAGATAGTTTTTATGTTTACCAATTTTTCAGAGTCCCAGAACTCTACGAAGGCATACTGGAGAATCCGCTTTACAGGAAGGTCTCTCTCTATCTGCATTCTTTGCCTTCCCTTGAAGATTCCGATTTTACCAACTTGATCACGGGGAAGAAGAACAACGGCATCGTTCTCTGCCTTGATCCGAAACAGATCATCGAGGACGATTTTCTCGGAGCTAGAGTTTTTTGGCTCAATGAAGGAGACGAGAAGACCAAGTCAAACCGTAACAGAGCGCTCATCCTCAAGATCAGGAAAGGTGACAAGCGCCGAATTCTCCGTCCTTATCTTCAGCACATCCACACCGTCGCTGATGAAATCGAGCAACAAGGAAAACGTGATTTGAGGCTGTTCATGATCACCGACCCTATTGGCGGCGGGAAAGGACGGTGGAGATCCGTCCCGTTTACGCATCCCTCAACTTTCGACACCATCACCATGGAATGCGACCTCAAGAACAAGGTGAAATCCGATCTCGAATCGTTCCTCAAGGCGAAGCAGTACTACAACCGACTCGGTCGCGTATGGAAACGGAGCTTCCTCCTGTACGGCCCTTCCGGCACCGGGAAATCGAGTTTTGTCGCCGCGATGGCCAATTTTCTCTGCTACGATGTGTACGATATGGATCTCTCGAAAGTCCCAAGCGATTCGGACCTGAAATCCATGCTGCTCCAGACGACTGCGAAATCAATCGTCGTCGTCGAAGACCTCGACAGGTTCCTCATCGAGAAATCTAAGGAGTTGAGCTTATCAGGGATTCTGAACTTCATGGACGGGATTCTGACCTCGTGCTGTGCCGAGGAGATGATCACGGTGTTCACGATGAACAGCAAGGAGCAAGTGGATCCGGATGTGCTCCGTCCGGGTCGGGTCGACGTCCACATCCAGTTTTGCCTGTGTGATTTCCCGGCGTTCAAGACGCTAGCAAGTAGCTATCTGGGGGTGAAGGACCACAAACTGTTCCCTCAAGTGGAGGAGATGTTTCAGAAGGGAGCGAGTCTGAGCGCGGCGGAAATCGGCGAGTTGATGATCGCGAATCGCAACTCTCCGAGTCGGGCGATTAAATCGGTCATAAGCGCCTTGCAAACGGACGGCGATGGGAGGGGGCGGGGCGGGAAGATCGGACGGCAGTTAGTGGACCGCGCGGTGGACGCAATGGACGAAGCGGATGGAGTTCTATGCGGTGAGGGTTTCCATACGGTTAAGGATTTGCGAAAACTGTACGGTTTCTTTAGATCAAAGACCCACAAGAAATCTCAACCGTTGTTGCTACGGCGATGA 1437 0.5031 MILHNPFFLFILIMFLLYITRVALFKTGLMYTVKKCWRIIEDSFYVYQFFRVPELYEGILENPLYRKVSLYLHSLPSLEDSDFTNLITGKKNNGIVLCLDPKQIIEDDFLGARVFWLNEGDEKTKSNRNRALILKIRKGDKRRILRPYLQHIHTVADEIEQQGKRDLRLFMITDPIGGGKGRWRSVPFTHPSTFDTITMECDLKNKVKSDLESFLKAKQYYNRLGRVWKRSFLLYGPSGTGKSSFVAAMANFLCYDVYDMDLSKVPSDSDLKSMLLQTTAKSIVVVEDLDRFLIEKSKELSLSGILNFMDGILTSCCAEEMITVFTMNSKEQVDPDVLRPGRVDVHIQFCLCDFPAFKTLASSYLGVKDHKLFPQVEEMFQKGASLSAAEIGELMIANRNSPSRAIKSVISALQTDGDGRGRGGKIGRQLVDRAVDAMDEADGVLCGEGFHTVKDLRKLYGFFRSKTHKKSQPLLLRR 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0124 478 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 158 411 IPR027417 -
Lele38g0124 478 Pfam ATPase family associated with various cellular activities (AAA) 233 349 IPR003959 GO:0005524|GO:0016887
Lele38g0124 478 Pfam Domain associated at C-terminal with AAA 33 116 IPR025753 -
Lele38g0124 478 Gene3D - 184 351 IPR027417 -
Lele38g0124 478 SMART AAA_5 228 353 IPR003593 -
Lele38g0124 478 PANTHER BCS1 AAA-TYPE ATPASE 41 414 - -
Lele38g0124 478 CDD AAA 229 349 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0124 Lele-ChrLele38 971572 973008 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0124 224 349 Calmodulin-binding Proteins AT3G56690 26.761 3.68e-06 47.8