Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0123 ATGAGCTTCTCATTAGAGTCCAACAGACAAAACAAATCAGTGAATGATTCTGAAACATTGAAGCCTCTCCAATCATTTTATTGCCCCATAACCAAGCAAGTTATGGAGGACCATGTTGAAACTTCATCAGCGAAGACATTTGAGAGAAGTGCCATAGAAAATGGTTTGCTGAAAGGAAAACTCCATTCCCAAGATGATGATGACGATGAAGTTCAACATTGTCTGGGAACTCTACAGGATTTGTGTGAACCAAGTGATATGCACAGGGAATGGCTGATTGTGGAGAATTACATACCAGTTCTTATCCTGATTCTTGGCGCGAAAAACCACGATGTAAGAACCCGCTCTCTAGCGCAGCCATCCTTAACATGCTGGCCAAGGATAGTGATGATGCTAAGGTACTATTTGTCTTCTGCTCTTTGCATAATACGTTGTCTCCCAAAAGTTCACCTGCTCACGCAGTGGCTTCTTGATGCCAGAGCACTTCCTATAATAAATAATCATCTCCAAGATTGTCAGGACATAATAATAGATTGCAAAAAGAGCAAGTTAATAGAGAATGCCATTGGAGTCTTGAGTCATTTCACTATTTCAACAAACCCAGAATGTGTGAAGTCATCATTTTGCCTTGTTGAAGCTGATGCAGTGAGGCCATTAGTGAGGACACTTGGGGAATCTGATCCAGAAGCTTCTGAGGCTTCTTTAGATGCATTATTGACATTACTTGAAGGAGAGAGACTTCAAAGTGGTAGCAAAGTGCTTGCAGAAGCAAATCCCATACCACTGGTAATAAAATGTCTTAATTCTTCATCTCTTGGATTACAGGAGAAGTCTCTGCATGCTTTGGAGAGGATTTTTCGGTTAATTGAGTTCAAACAGTTGTATGCAGCCTCAGCTCATATGCCTCTAGTTGATTTACCTCAGAGAGGAAATGAGCGTGTGAGATCTCTGGCAGCTAGAGTTTTGGCACATTTAAACGTGCTTCATTATCAGTCTTCTTATTTCTAA 1008 0.4087 MSFSLESNRQNKSVNDSETLKPLQSFYCPITKQVMEDHVETSSAKTFERSAIENGLLKGKLHSQDDDDDEVQHCLGTLQDLCEPSDMHREWLIVENYIPVLILILGAKNHDVRTRSLAQPSLTCWPRIVMMLRYYLSSALCIIRCLPKVHLLTQWLLDARALPIINNHLQDCQDIIIDCKKSKLIENAIGVLSHFTISTNPECVKSSFCLVEADAVRPLVRTLGESDPEASEASLDALLTLLEGERLQSGSKVLAEANPIPLVIKCLNSSSLGLQEKSLHALERIFRLIEFKQLYAASAHMPLVDLPQRGNERVRSLAARVLAHLNVLHYQSSYF 335
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0123 335 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 14 66 IPR013083 -
Lele38g0123 335 SUPERFAMILY RING/U-box 23 60 - -
Lele38g0123 335 Gene3D - 67 333 IPR011989 -
Lele38g0123 335 PANTHER RING-TYPE E3 UBIQUITIN TRANSFERASE 17 54 - -
Lele38g0123 335 SUPERFAMILY ARM repeat 65 325 IPR016024 -
       

Duplication type information


Select Gene Chromosome Start End Duplicated_type
Lele38g0123 Lele-ChrLele38 964785 966011 Dispersed/Wgd
       

Functional genes information


Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0123 204 335 U-box Gene Family AT1G76390 31.618 2.23e-08 53.9