Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0117 ATGGGAAGAGCTCCTTGCTGTGCAAAAGTAGGGTTGCACAGAGGTCCTTGGACTCCTAAAGAAGACGCATTGCTCACCAAGTACATACAAACTCATGGTGAAGGCCAATGGCGATCCTTACCTAAACGAGCTGGGCTTTTGAGGTGTGGAAAAAGTTGCAGGCTGAGATGGATGAACTATCTGAGACCAGACATAAAGAGAGGAAACATAACACCAGAAGAAGAAGATCTCATAATCAGAATGCATTCTCTTCTGGGGAATCGATGGTCTCTCATTGTGGGAAGATTGCCTGGGAGAACAGATAACGAAATCAAGAACTACTGGAACACACATCTCAGCAAAAGGCTAAGGAATCAAGGAACCGACCCAAACACTCACAAGAAGCTCTCCTCCCTGCTACCTAATAATACAAGTTCCAAGAAGAAAGCAAGTAAGAAGAAGAAGAAAGGGAAGGCGCGTGAGAATAACGGAGAACGAGAAGAGAAAGATGAAGAGAAGAAAACGATAGTGTATCTGCCGAAGCCAATCAGAATCACAGCCTGTTTGTCTTCTCCGATTCCCAGAAGTGACAGTAACCAGAACTTGAACTCGTTCGATTCCAACTCAGCTAGTGGATCTACGAGCCAAGAGAAAGAGGAAGAGAAGAAAGGGAACGTTGATTGGGGAGAGAATAATGATAATAATAATAAGTATAGTAATTACCATGATTATAACTATACTTATGGTGGGGACGAAGAAGATCGTACTAATGGTTTTGTGGGAACGTTCCTTGAGGAAGACCACGAGTTGGTCAACGGGTCTGACGTGGAGGGGCAATCGGAGTTTCCGACGTCGGCGGAGCAGCACGGGACGCTGGAGAAGCTGTACGAGGAATACTTCCAGCTGTTGAATAGCAAAGAAAACCAAGAGGAGCTAGAATCTTTTGCTGAATCCTTGCTGGTCTGA 945 0.4508 MGRAPCCAKVGLHRGPWTPKEDALLTKYIQTHGEGQWRSLPKRAGLLRCGKSCRLRWMNYLRPDIKRGNITPEEEDLIIRMHSLLGNRWSLIVGRLPGRTDNEIKNYWNTHLSKRLRNQGTDPNTHKKLSSLLPNNTSSKKKASKKKKKGKARENNGEREEKDEEKKTIVYLPKPIRITACLSSPIPRSDSNQNLNSFDSNSASGSTSQEKEEEKKGNVDWGENNDNNNKYSNYHDYNYTYGGDEEDRTNGFVGTFLEEDHELVNGSDVEGQSEFPTSAEQHGTLEKLYEEYFQLLNSKENQEELESFAESLLV 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0117 314 MobiDBLite consensus disorder prediction 184 207 - -
Lele38g0117 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele38g0117 314 MobiDBLite consensus disorder prediction 151 166 - -
Lele38g0117 314 MobiDBLite consensus disorder prediction 182 231 - -
Lele38g0117 314 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele38g0117 314 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 223 - -
Lele38g0117 314 MobiDBLite consensus disorder prediction 115 166 - -
Lele38g0117 314 MobiDBLite consensus disorder prediction 115 139 - -
Lele38g0117 314 CDD SANT 71 112 IPR001005 -
Lele38g0117 314 FunFam MYB transcription factor 68 129 - -
Lele38g0117 314 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele38g0117 314 Coils Coil 285 305 - -
Lele38g0117 314 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele38g0117 314 SMART sant 66 114 IPR001005 -
Lele38g0117 314 SMART sant 13 63 IPR001005 -
Lele38g0117 314 FunFam Myb transcription factor 11 67 - -
Lele38g0117 314 Gene3D - 14 66 - -
Lele38g0117 314 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele38g0117 314 CDD SANT 16 61 IPR001005 -
Lele38g0117 314 Pfam Myb-like DNA-binding domain 67 112 IPR001005 -
Lele38g0117 314 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele38g0117 314 Gene3D - 69 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0117 Lele-ChrLele38 909698 910817 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0117 4 131 MYB Transcription Factor Family AT3G13540 72.656 4.23e-69 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele38g0117 Myb_DNA-binding 7.2e-14 CL0123