Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0112 ATGGAAGCGAAACCCCACCAACCATGCGCAGCTTGCAGGATGCTTCGCCGGAAATGTGACCGCAACTGCCTCCTCGCTCCATACTTTCCGGCCGACGAGCTTGACAAGTTCGTTGTTGTTCACAGAGTCTTCGGCGCCAGCAACGTTATCAAAATGATTCAGATGGTGGAGGAGAAGAAGAGGGAGGACGCAGTGAAAGCTATAGTGTACGAGGCAATGGCGAGGATGAGGGATCCAGTGTATGGCAGTGCAGGGGCGATACAGCAGCTGCAGAAGATGGTTCAACAGCTCAAAGTGGAGGTGGAAGCCATGAAAGCTAGGGTTTCAGAGGTGCAAGAACAAAGAGACCAGTTGCTCATGAATCTTGTTCATACCAACCATGATATTGATCCTATTCCTCATCAGTTTCCCATCAATATTAATGTCCAAGATTCTTTCTTTGATGACTATTACTCGGCTTTTTCGTCAGACCCACTGGAGGATCAGTATCCTCTGCAAGGCGACTGGGTGTTGTAG 516 0.4922 MEAKPHQPCAACRMLRRKCDRNCLLAPYFPADELDKFVVVHRVFGASNVIKMIQMVEEKKREDAVKAIVYEAMARMRDPVYGSAGAIQQLQKMVQQLKVEVEAMKARVSEVQEQRDQLLMNLVHTNHDIDPIPHQFPININVQDSFFDDYYSAFSSDPLEDQYPLQGDWVL 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0112 171 Coils Coil 87 121 - -
Lele38g0112 171 SUPERFAMILY Spectrin repeat 64 129 - -
Lele38g0112 171 Pfam Lateral organ boundaries (LOB) domain 8 105 IPR004883 -
Lele38g0112 171 ProSiteProfiles LOB domain profile. 7 108 IPR004883 -
Lele38g0112 171 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 7 116 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0112 Lele-ChrLele38 874267 874913 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0112 8 119 AS2 family AT2G28500 53.571 4.96e-40 133
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Lele38g0112 LOB 1.8e-38 No_clan