Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0105 ATGGAATCCGAAACACCACGGAAAATTGAGGAAATGTTGCTGGACATACTGAAGAATTCCAACATTGATGAGGCGACTGAGTTCACAGTCCGACTCGCGGCGTCGGAGCGGCTCGGGATGGATCTTTCTAACTCGGAACACAAGCTGCTTGTGAGAGGCATTGTGGAATCGTATCTGCTCGCTATCGCGGAGGAAGAAGGTGGAAGGGTCCCCGCGTCTGAGCCGAGTGCTCCCCAAGAGACTCGAGAGGTGATGCAGTATGAGCAGGTGGTGAAGCCAAAAAAAGAGGTTAAGGACGACTCGGAGCGTATAATTTGCCAGCTATCAAACAAGAGGAATGTGGAGGTTCATGATTTCAGAGGGAAAAAATTAGTCTCAATCAGGGAATTTTATCGCAAAGATGGAAAACAGCTCCCTTCAGCTAAAGGGATAAGTTTGCCGACTGAACAATGGGCTATCTTCAAGAAAAATGTCCCTGTTATAAAGGAAGCTATCACAAAGATGGGAGCAAAGATGCGGTCCGAGGTCCATGGTAACCAAAATGGATATCTGCCGAACCCAATTCATGGTAAACAAAGTGGAGATGTGCCGAATCCAATTCATGTCAAGCAAAATGGAGATGTGCTGAACCCAGTTCATGGCAAGCAAAATGGAGAAGTGCTGAACCCAGTTCACGGTGAGCAAAATGGAGAAGTGCCGAACCCAATTCATGGGGAGCAAAATGGAGAAGTGCCGAACCCAATTCATGGTGAGCAAAATGGAAATGTGCTGAACCAAATTCTTGATGCTGCTCCTCCTGAACCTGTCCCTATTGAAATCAACCGTTTTGACGGAAAAAATTACCAATTGTGGGTTCAGCAGATGGAATCACTCTTAAAACAACTAAAGATTGCATATGTTCTCACTGAACTATGCCCAAATGCTACAACAGGACCGCATTCAAGTGCTGAAGAAGTTGCTGAAGCCAGGGCAGCGGAAAAGAGGTGGGGTGTTTGCATCAAGCTAATGCGTGAAGAGTATCTACCGTTATGGATGTTAATGGAACGTTTGAGGACGGAGGAAGAATCTCGCAATCAAGTCAAACAAGGGGGTGAACCTTCCAGTGAAACAGAATGGTTGATTGGAAAGCATGTGGCAGTGCTCTCTTACGCAGAGCCTTTTGGAGAAGTTTTTGACGAGATTTGGTTGACAGAAAGTGCTGCCAAATCGACCACGAAGTTCCTTGTAACCATGTTTGGTGGGTTCTACGGAATTGTTTTGGTCCGTGAGAAGGTATTTTTTCAACTGGTGCTTTTCTCCAGTGGGCAGGATCTGATCTGTACGTAG 1326 0.4615 MESETPRKIEEMLLDILKNSNIDEATEFTVRLAASERLGMDLSNSEHKLLVRGIVESYLLAIAEEEGGRVPASEPSAPQETREVMQYEQVVKPKKEVKDDSERIICQLSNKRNVEVHDFRGKKLVSIREFYRKDGKQLPSAKGISLPTEQWAIFKKNVPVIKEAITKMGAKMRSEVHGNQNGYLPNPIHGKQSGDVPNPIHVKQNGDVLNPVHGKQNGEVLNPVHGEQNGEVPNPIHGEQNGEVPNPIHGEQNGNVLNQILDAAPPEPVPIEINRFDGKNYQLWVQQMESLLKQLKIAYVLTELCPNATTGPHSSAEEVAEARAAEKRWGVCIKLMREEYLPLWMLMERLRTEEESRNQVKQGGEPSSETEWLIGKHVAVLSYAEPFGEVFDEIWLTESAAKSTTKFLVTMFGGFYGIVLVREKVFFQLVLFSSGQDLICT 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0105 441 SUPERFAMILY ssDNA-binding transcriptional regulator domain 105 167 IPR009044 GO:0003677|GO:0006355
Lele38g0105 441 Pfam Transcriptional Coactivator p15 (PC4) 106 157 IPR003173 GO:0003677|GO:0006355
Lele38g0105 441 PANTHER RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATOR 3 169 IPR045125 GO:0003713|GO:0060261
Lele38g0105 441 Pfam DEK C terminal domain 5 59 IPR014876 -
Lele38g0105 441 Gene3D Transcriptional Coactivator Pc4; Chain A 96 173 IPR009044 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0105 Lele-ChrLele38 794829 798353 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Coactivator p15 Lele38g0105 DEK_C 9.2e-09 No_clan