Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0095 ATGGATGCCAAGGGACGAAAAGTTGTGAGGTTTAAGTACTGGAGTTCAGAATCATCTTTCAGTGTTGAGAAAACAAATTATGCTGATGATGGATATCCTCAGAGAAAAGTTAGACTAAGAGCAAGAGCTGTGTTTAAGAATATTAGAAGAAGAATCCAGAGAAGGCTTGAGAAGATTAAAACCTTGAGAAAACCTGTAAATGTGCATCCAGTAAGTGATGCGACGACCAAGAAACCGGCTTCGGAGAGGAAGATTCTTGATCCACAAGGGTCTTTCCTTCAGAAATGGAACAAAATATTTGTGATCACATGTGTACTGGCAGTATCTGTGGATCCTCTGTTCTTTTACATCCCAGTTATTGATAACAACAGAAAATGCCTTGATTTGAATAAACCATTGCAGATTACTGCCAATGTTCTTCGTATCTTCTTTGACCTTTTCTACATTCTCCACATAACATTTCAGTTTCGAACGGGTTTTATCGCCCCTTCTTCTCGAGTATTTGGTAGGGGTGAGCTCATTGATGATCCTAAGGCTATTGCAAAACGATACTTATCTTCATACTTTATCATTGACATCCTCTCAATTATTCCAGTTCCACAGGTGGTTGTTTTAGCAATGAGACATTCAGTTCCATCTGAAGAAAAGGACTGGTTATATTATGCAATATTAATCCAATATGTCCCTAGATTTCTTCGGATCTATCCATTATTCACAGAAGTAACTAGAACTTCTGGCATACTGACTGAGACAGCATGGGCTGGCGCTGCTTATAATCTCTTCCTCTATATGCTAGCAAGTCATGTGGCTGGAGCTTTCTGGTACCTGTTTTCAGTAGAATCAGAGCTTCGGTGCTGGCACAGAGAATTGAAGAATGCTAATTTGCCTATATACATGAGCTGTCCATACCAGAATCCGAATGTCAGAACACTTCTCAATAATTCTTGTCCCTTCAAGGATCCTGACGAAATTGACAACTCTAAAGTCTTCAATTTTGGAATATATACTGATGCTTTAAAGTCTCATGTGGTGGAAACAACAATGGATTTTCCTCAAAAGATCTTCTTCTGCTTTTGGTGGGGTTTGCGCAATGTAAGTTCTCTGGGACAAAATCTCAAGACAAGTACATACGTCGGGGAGATCATCTTTGCTTGCTTCATCGCAATCTTTGGGCTGGTTTTGTTCTCATTACTCATTGGAAACATGCAGAAATATCTACAATCTGTAACTGTTAGAGTTGAAGAAATGAGAATCAAGAGGCGGGATGCAGAGCGGTGGATGTCCCACCGTATGCTACCTGAGCACTTGAGGGAAAGAATCAGACGTTATGAGCATTACAAATGGCAAGAAAACAGGGGTGTGGATGAGGAAACATTAATCCACAATCTTCCTAAAGATCTCAGAAGAGACATAAAGCGTCACCTTTGCTTGGATTTACTTAGAAAAGTTCCAATGTTTGAGAAAATGGACGAGCAGTTGTTGGATGCACTTAGTGATAGGCTGAAGCCAGTACTTTATACAGAGAAGAGCCACATCATTAGGGAAGGAGATCCAGTGGATCAAATGCTGTTTATTATGAGAGGAAACCTTTCTACAATGACAACAAATGGTGGAAGAACTGGTTTTTTCAACTCTTTCGTGATCAAGGCGGGTGATTTCTGTGGAGAGGAGCTTCTAACATGGGCCTTGGACCCCAACTCATCCTCAAATCTTCCCATTTCAACCAGAACAGTGGAATCTATATCAGAAGTTGAGGCCTTTGCTCTCATGGCTAATGACTTGAAGCTCGTTGCTTCCCAATTTCGACGCCTTCACAACAAACACATCCAGCACACTTTCAGGTACTATTCCTTGCAATGGAGGACATGGGCTGCCTGTTTCATACAAGTAGCATGGCGTCGCCACTGTAAAAGGAAGATTGAGAAAGCTTTACGTGAAGCAGAAGATAGGCTACAAGATGCTTTGGCAAAGGAGGAAGGTTCTTCTGTAAGTTTTGGTGCCACCATATATGCATCAAGGTTTGCTGCCAATGCGTTACGCAGCCTTAGGAAAAATAGGGACCGAAAAAACAACAGAATGTCTCAGAGATTGCTGCCTCTGCTGCCTCAGAAGCCAACTGAGCCTGATTTCACTACACAATCTTTAGGAGAATCTTAG 2157 0.4131 MDAKGRKVVRFKYWSSESSFSVEKTNYADDGYPQRKVRLRARAVFKNIRRRIQRRLEKIKTLRKPVNVHPVSDATTKKPASERKILDPQGSFLQKWNKIFVITCVLAVSVDPLFFYIPVIDNNRKCLDLNKPLQITANVLRIFFDLFYILHITFQFRTGFIAPSSRVFGRGELIDDPKAIAKRYLSSYFIIDILSIIPVPQVVVLAMRHSVPSEEKDWLYYAILIQYVPRFLRIYPLFTEVTRTSGILTETAWAGAAYNLFLYMLASHVAGAFWYLFSVESELRCWHRELKNANLPIYMSCPYQNPNVRTLLNNSCPFKDPDEIDNSKVFNFGIYTDALKSHVVETTMDFPQKIFFCFWWGLRNVSSLGQNLKTSTYVGEIIFACFIAIFGLVLFSLLIGNMQKYLQSVTVRVEEMRIKRRDAERWMSHRMLPEHLRERIRRYEHYKWQENRGVDEETLIHNLPKDLRRDIKRHLCLDLLRKVPMFEKMDEQLLDALSDRLKPVLYTEKSHIIREGDPVDQMLFIMRGNLSTMTTNGGRTGFFNSFVIKAGDFCGEELLTWALDPNSSSNLPISTRTVESISEVEAFALMANDLKLVASQFRRLHNKHIQHTFRYYSLQWRTWAACFIQVAWRRHCKRKIEKALREAEDRLQDALAKEEGSSVSFGATIYASRFAANALRSLRKNRDRKNNRMSQRLLPLLPQKPTEPDFTTQSLGES 718
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0095 718 FunFam Cyclic nucleotide-gated ion channel 1 483 601 - -
Lele38g0095 718 Gene3D - 98 411 - -
Lele38g0095 718 Coils Coil 637 657 - -
Lele38g0095 718 Gene3D Helix hairpin bin 412 476 - -
Lele38g0095 718 Gene3D Jelly Rolls 483 603 IPR014710 -
Lele38g0095 718 SUPERFAMILY Voltage-gated potassium channels 87 407 - -
Lele38g0095 718 MobiDBLite consensus disorder prediction 685 718 - -
Lele38g0095 718 FunFam Cyclic nucleotide-gated ion channel 1 412 476 - -
Lele38g0095 718 Pfam Ion transport protein 96 413 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele38g0095 718 CDD CAP_ED 485 616 IPR000595 -
Lele38g0095 718 SMART cnmp_10 485 616 IPR000595 -
Lele38g0095 718 ProSiteProfiles cAMP/cGMP binding motif profile. 485 569 IPR000595 -
Lele38g0095 718 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 75 710 - -
Lele38g0095 718 SUPERFAMILY cAMP-binding domain-like 414 610 IPR018490 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0095 Lele-ChrLele38 744469 748193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0095 1 712 Ion Channels AT5G53130 63.347 0.0 920