Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0094 ATGAGGCTTCAGAGCTGGAACAAAATATTACTAATGATATGTGTAATGGCGCTGCTTGTTGATCCAATCTTCTTTTACATCCCCCAGATTGATGCCAACCGAAAATGCCTTGTTTTGGACAAGCCCTTGAAGATTACAACTTGTGCTGTTCGCACTTTCCTTGATCTTTCCTACTTCGTTCTCCATCTCATGCTTCGGTTTCGACCTTATTTTATCGTACCTCATTCTTCGCCTTTTCCACGAATATTTGGCGAGCTCGTTGTTGTTGATTCTGAAGCTGTTGCAAAAAGTTCCTTATCCAAATTCATCATTGACGTCTTCTCAATTATTCCACTCCCCCAGGTGTTTGTCTTATTTGTTCCATTACTAGATAAGGAATATTTAAAGTATATAGTACTAGTCCAGTATGTGCCAAGAATCGTTCGGATGTATCCATTCTTCAGAGAAGTAACCAGAACTGCTGGCAATATACTTACTGACAAAGCATGGGCCGCTGCTGCTTATAATCTCCTTCTCTTTATGCTTGCAAGCCACGTGGTTGGCTCAGTGTGGTACCTACTTTCAATAGAATCAGAGATTCGATGTTGGAGTCAAGAATTGAAGAATGCTAATCTCTCTGCTGCAACTAAATACATGAGATGTGGACACCAGAATTCAACTGTCTTGTCACTTCTTAAAAGTTCTTGCCCCTTGAAAAATCCTGATGAGATTGACGACCCAGCAGCAGTCTTCAATTTCGGAATATTTATCGATGCTTTCAGATCTCGTGTGGTCGAATCAACGACGAATTTTCCTCAGAAGATCTTGTACTGCTTCTGGTGGGGTCTGCGCAATGTCTGTTCTCTGGGGCAAGACCTCAAGACTAGTACATTTATCGAGGAAATATTCTTCACTGTCTTCATTGCCATCTTCGGTTTGATTTTATTCGCGTTGCTTATTGGAAACGTGCAGAGATATCTACAATCCATGCAATCTACAGCAGTTAAAGCTGAAGAAATGAGAGTGAATATACAGAATATAGATAAATGGATGTCCCAGCGTAAGCTACCAGACCACTTGAAGAAAAGAATCAAACGATATGAACATTACAAATGGGAACAACATGAGGGTGTAGATGAGGAAACATTAATCCACAGTCTTCCTAAAGACCTGAGAAGGGACATAAAGCGTCACCTTTGCTTGCACTTACTTGTGAAAGTGCCAGTGTTCCGGGACATGGATGATCGGTTGTTGAATGCACTTTGTGATAGGATGAAGCCAGTACTGTATACAGAGAATAGCTACATTGTTCGCGAAGGAGATCCAGTTGATGAAATGGTCTTCATTATTCGAGGAAACCTTGCATCTATGGCAAAAATTGTCGGAAGAATTAGTTTTCTCGACTCTTTTGTGATCCAGGCGGGTGGATTCTGCGGAGAGGAGCTTCTAACATGGGCCTTCGACTCCCTCTCATCCCCAGAAGTTCCCATTTCAACCAGAACTGTGGAATCCATATCAGAAGTTGAAGCCTTTGCTCTCATGGCTAATGACTTGAAGCTCGTCGCTTCTCGATTTCCACGCTTTCACGAACACCAGCACACTTTCAGGTTCTATTCCTCTCAATGGAGGACATGGGCTGCGTGTTTCATACAAGCAGCTTGGCGTCGGCACCGCAGAAGGAAGCTCGAGAAAGCTTTACGTGAAGCAGAAGACAGGCTACAAGATGCTTTGGCAAAAGAGGAAGGTTCTTGTGTGAGTTTTGGCGCCACCATTTATGCATCAAGGTTTGCTGCCAATGCCTTACGCAGCCTTAGAAAGAGAGGTCGCTCTTTTCCAGTTAGCCTTGGAAAAGAGCATTACAAATCGCAAGATAACGGGGGTGTGGATGAGGAAACATTAATCCACAATCTTCCCAAAGATCTCAGAAGAGACATAAAGGGTCACCTTTGCTTGGATTTACTTAAAAAAGTGCCAATGTTTGCCAAAATGGACGAGCAGTTGTTGGAAGCACTTAGTGATAGGCTGAAGGCAGTACTTTATGCAGAGAAGAGCCACGTTATAAGGGAAGGAGATCCAGTGGATCAAATGCTTCTCATTATGAGAGGAAACCTTGCTTCTTTGACAACAAATGGTGGAAGAACTGGTTTTTGCAACTCTTTCGTTATCAAGGCGGGCGACTTCTGTGGAGAGGAGCTTTTAACATGGGCGTTCGACCCCAACTCATCCTCAAATCTTCCCATTTCAACCAGAACTGTGGAATCCATATCTGAAGTTGAAGCCTTCGCTCTCATGCCTAATGACTTGAAGCTCGTTGCTTCCCAATTTCGACGCCTTCACGACAAACACATCCAGCACACTTTCAGGCAAGGCCTATATATGTCATCATGCATGTTTCTACTTGCCATTCATGCCAACCGAAAATGCCTTGTTTTGGACAGACCGCTAAAGATTATAACTTGTGCTCTTCGCACTTTCCTGGATCTTTTCTACTTCATTCTCCATGTCATGCTTCAGTTTCGAGCTGGTTTTATCGCCCCTTCTAGTCGAGTATTTGGTCGTGGTGAGCTCATTCTTGATCCTGAGGCTGTCGTAAAAAGATACTTATCATCCAAATTCATCATTGACCTCGTGTTTGTTTTAGTTCCATTAATAATGGAAAAGGAATATTTGAAGTATATAGTATTAGCTCAGTATGTGCCAAGAATTGTTCGGATGTATCCATTCTTCAGAGAAGTAACTAGAACTGAGAAAGCATGGGCTACTGCTGCTTATAATCTCCTTCTCTATATGCTTGCAAGCCATATGGTTGGCTCAGTGTGGTACCTACTTTCAGTAGAATCAGAGATTCGATGTTGGAATCAAGAATTGAAGAATGCTAATCTCTCTGCTGCAACTAAATACTTGAGCTGTAGACACCAGAATTCGACTGTCTTGTCACTTCTCAAAAGTTCTTGCCCCTTGAAAAATCCTGATGAGATTGACGACCCAGCAGCAGTCTTCAATTTCGGAATATTTATCGATGCTCTCAGATCTCGTGTGGTGGAATCAACAACGAATTTCCGTCAGAAGATCTTCTACTGCTTTTGGTGGGGTTTGCGCAATGTGAGTTCTCTGGGGCAAGACCTCAAGACTAGTACATTTATTGAGGAAATACTCTTCACTGTAAATATGGTATTTGCTAGTTTCTTCGATTACATCACAGAAAAGACTTGTGCATTTGAAGTGATAAATATGAGATATCTACAATCCATGCAATCTACAGCAGTTAGAGCAGAAGAAATGAGATTGAAAATACAGAGTATAGAGAAGTGGATGTCCCGGAGCATGCTACCTGTAAGCTTGAGGGAAAGGATCATGCAGTATGAACATTGCAAATGGGAACAACATGAGGGTGTGGATGAGGAAACATTAATCAGCAATCTTCCTAAACATCTTAGAAGGGATGTAAAGCGTCACCTTTGCCTGGGTTTACTTATCAGAGTGCCAGTGTTTGAGAGAATGGATGGGCGGTTGATCGATGCACTTTGTGATAGGATGAAGCCAGTGCTGTATACAGAGGAAAGCTACATTGTTCAAGAAGGAGATGCAGTTGATGAAATGCTATTCATTATGAGAGGAAAACTTAATTCAATGACAACAAATGGTGGAAGAACTGGTTTTTTCAACTCCTGGCTTATCAAGGAAGGTGACTTCTGCGGAGATGAGCTGTTAACATGGGCCTTTGACCCCAACTCTTGCTCAAGTCCTCCCGTTTCAACCAGAACTGTACAATCTATAACAGAAGTTGAAGCCTACGCTCTCATGGCTTACGACTTGAAGCTCGTTATCCAAAATCAATGCGTTATTAACAAACACATGGAGCACACTTTAAGGTTCTATTCCCTGCAATGGAGGACATGGGCTGCCTGTTTCATACAAGCAGCTTGGCGTCGCCATGTGAGGAGGAAGATGAAGAAATCAGAAGCTTTTGCAGATGATGAACAATGCGCTGTGAAGAAGCCCAGATAA 3987 0.4249 MRLQSWNKILLMICVMALLVDPIFFYIPQIDANRKCLVLDKPLKITTCAVRTFLDLSYFVLHLMLRFRPYFIVPHSSPFPRIFGELVVVDSEAVAKSSLSKFIIDVFSIIPLPQVFVLFVPLLDKEYLKYIVLVQYVPRIVRMYPFFREVTRTAGNILTDKAWAAAAYNLLLFMLASHVVGSVWYLLSIESEIRCWSQELKNANLSAATKYMRCGHQNSTVLSLLKSSCPLKNPDEIDDPAAVFNFGIFIDAFRSRVVESTTNFPQKILYCFWWGLRNVCSLGQDLKTSTFIEEIFFTVFIAIFGLILFALLIGNVQRYLQSMQSTAVKAEEMRVNIQNIDKWMSQRKLPDHLKKRIKRYEHYKWEQHEGVDEETLIHSLPKDLRRDIKRHLCLHLLVKVPVFRDMDDRLLNALCDRMKPVLYTENSYIVREGDPVDEMVFIIRGNLASMAKIVGRISFLDSFVIQAGGFCGEELLTWAFDSLSSPEVPISTRTVESISEVEAFALMANDLKLVASRFPRFHEHQHTFRFYSSQWRTWAACFIQAAWRRHRRRKLEKALREAEDRLQDALAKEEGSCVSFGATIYASRFAANALRSLRKRGRSFPVSLGKEHYKSQDNGGVDEETLIHNLPKDLRRDIKGHLCLDLLKKVPMFAKMDEQLLEALSDRLKAVLYAEKSHVIREGDPVDQMLLIMRGNLASLTTNGGRTGFCNSFVIKAGDFCGEELLTWAFDPNSSSNLPISTRTVESISEVEAFALMPNDLKLVASQFRRLHDKHIQHTFRQGLYMSSCMFLLAIHANRKCLVLDRPLKIITCALRTFLDLFYFILHVMLQFRAGFIAPSSRVFGRGELILDPEAVVKRYLSSKFIIDLVFVLVPLIMEKEYLKYIVLAQYVPRIVRMYPFFREVTRTEKAWATAAYNLLLYMLASHMVGSVWYLLSVESEIRCWNQELKNANLSAATKYLSCRHQNSTVLSLLKSSCPLKNPDEIDDPAAVFNFGIFIDALRSRVVESTTNFRQKIFYCFWWGLRNVSSLGQDLKTSTFIEEILFTVNMVFASFFDYITEKTCAFEVINMRYLQSMQSTAVRAEEMRLKIQSIEKWMSRSMLPVSLRERIMQYEHCKWEQHEGVDEETLISNLPKHLRRDVKRHLCLGLLIRVPVFERMDGRLIDALCDRMKPVLYTEESYIVQEGDAVDEMLFIMRGKLNSMTTNGGRTGFFNSWLIKEGDFCGDELLTWAFDPNSCSSPPVSTRTVQSITEVEAYALMAYDLKLVIQNQCVINKHMEHTLRFYSLQWRTWAACFIQAAWRRHVRRKMKKSEAFADDEQCAVKKPR 1328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0094 1328 ProSiteProfiles cAMP/cGMP binding motif profile. 652 736 IPR000595 -
Lele38g0094 1328 ProSiteProfiles cAMP/cGMP binding motif profile. 402 463 IPR000595 -
Lele38g0094 1328 SUPERFAMILY Voltage-gated potassium channels 4 322 - -
Lele38g0094 1328 SUPERFAMILY cAMP-binding domain-like 330 524 IPR018490 -
Lele38g0094 1328 Coils Coil 552 572 - -
Lele38g0094 1328 SUPERFAMILY cAMP-binding domain-like 1085 1279 IPR018490 -
Lele38g0094 1328 Gene3D Helix hairpin bin 1082 1147 - -
Lele38g0094 1328 ProSiteProfiles IQ motif profile. 536 565 IPR000048 GO:0005515
Lele38g0094 1328 SMART cnmp_10 402 533 IPR000595 -
Lele38g0094 1328 SMART cnmp_10 1156 1287 IPR000595 -
Lele38g0094 1328 SMART cnmp_10 652 787 IPR000595 -
Lele38g0094 1328 Pfam Ion transport protein 789 1056 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele38g0094 1328 Pfam Ion transport protein 4 326 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele38g0094 1328 Gene3D Jelly Rolls 650 770 IPR014710 -
Lele38g0094 1328 Gene3D Jelly Rolls 400 520 IPR014710 -
Lele38g0094 1328 Gene3D Jelly Rolls 1154 1272 IPR014710 -
Lele38g0094 1328 Gene3D - 8 324 - -
Lele38g0094 1328 SUPERFAMILY cAMP-binding domain-like 641 770 IPR018490 -
Lele38g0094 1328 FunFam Cyclic nucleotide-gated ion channel 1 650 768 - -
Lele38g0094 1328 CDD CAP_ED 1156 1260 IPR000595 -
Lele38g0094 1328 ProSiteProfiles cAMP/cGMP binding motif profile. 1156 1240 IPR000595 -
Lele38g0094 1328 CDD CAP_ED 652 781 IPR000595 -
Lele38g0094 1328 FunFam Cyclic nucleotide-gated ion channel 1 1154 1272 - -
Lele38g0094 1328 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 3 593 - -
Lele38g0094 1328 SUPERFAMILY Voltage-gated potassium channels 804 1056 - -
Lele38g0094 1328 CDD CAP_ED 402 521 IPR000595 -
Lele38g0094 1328 Gene3D Helix hairpin bin 326 393 - -
Lele38g0094 1328 ProSiteProfiles IQ motif profile. 1291 1320 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0094 Lele-ChrLele38 733058 742303 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0094 596 781 Ion Channels AT5G53130 69.355 4.18e-76 266