Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0093 ATGTACAGGTCTCTCTCTGTGCAAGATTCTACTCTAAACTCTGCAATTATGGGATTTGAACATCAATCATCAGAATACTCGAACCTCGATCCAGTCTTAGTATCTGAGTTGCAAGACAAGAAAGAAGCAATTTTGTGTTCCTACGCTTCATGGCTAGAAAAGCATCCCTCTGGATTGGACAAGTTTGAGGAAATGATGAGCATTGCTAAAGAGAAAGAGATTCTTGTGTTTTTGGACTATGATGGAACTCTCTCTTCCATTGTCGATGACCCCGATCACGCTCATATGACTGATGCTATGCGCACAGCAGTAAATGAAGTTGCTTGTTGTTTTCCTACCGCAATTATCAGTGGAAGGAGTAGAAAAAAGCTATGCGAATTTGTGAGGTTGAGAAATGTGTACTATTCTGGAAGTCATGGGATGGATATATCAACCCCAAAAGGCTCTTCCAAATCAGAAGACCAGAAACATCAGACTAAGGCTGTTGATGAAAAGGGTAATGAAGTAGTTCACTTTCATCCCGCAGAAGAATTCCTGCCAACTATCAAGGAGATAATCCAGGTTCTGAAAGAGAATGTTCTAACAATAAAGGGGTCCAAGATAGAGGACAATATGTTCTGCATCACTGTACACTACAGGCTTGTGAAAAATGAAAAGGAAGTTGGTATTCTCAGAAAGATGGTGGAGTCTATCATGGAAGCTTACCCCAATTTTCACATTTCAGGAGGTAGAAAGGTTATAGAGATACGCCCAAATATAAATTGGGATAAAGGTTGTGCTGTGCAGTATTTGCTTGGCACTCTTGGCTTTAACAGCTTCGATAACATCATGCCACTCTACATAGGGGATGATACAACTGATGAAGACGCTTTTAAGGTTATAAGAGACATTGGACAAGGTTTTCCGATCATTGTTTCTTCAAAAGCTAAGGAGACCAAAGCTTGTTATTCTCTGCGTGATCCTGATGATGTTTTGTCTTTCTTAAAACGTCTTGCTAAGTGGAAGAAAAGCTTGTTATAA 1020 0.399 MYRSLSVQDSTLNSAIMGFEHQSSEYSNLDPVLVSELQDKKEAILCSYASWLEKHPSGLDKFEEMMSIAKEKEILVFLDYDGTLSSIVDDPDHAHMTDAMRTAVNEVACCFPTAIISGRSRKKLCEFVRLRNVYYSGSHGMDISTPKGSSKSEDQKHQTKAVDEKGNEVVHFHPAEEFLPTIKEIIQVLKENVLTIKGSKIEDNMFCITVHYRLVKNEKEVGILRKMVESIMEAYPNFHISGGRKVIEIRPNINWDKGCAVQYLLGTLGFNSFDNIMPLYIGDDTTDEDAFKVIRDIGQGFPIIVSSKAKETKACYSLRDPDDVLSFLKRLAKWKKSLL 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0093 339 Pfam Trehalose-phosphatase 77 321 IPR003337 GO:0003824|GO:0005992
Lele38g0093 339 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 75 297 IPR006379 -
Lele38g0093 339 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 41 336 IPR044651 GO:0004805|GO:0005992
Lele38g0093 339 FunFam Trehalose 6-phosphate phosphatase 175 252 - -
Lele38g0093 339 SUPERFAMILY HAD-like 75 335 IPR036412 -
Lele38g0093 339 TIGRFAM T6PP: trehalose-phosphatase 73 333 IPR003337 GO:0003824|GO:0005992
Lele38g0093 339 Gene3D - 74 172 IPR023214 -
Lele38g0093 339 Gene3D - 180 338 IPR023214 -
Lele38g0093 339 CDD HAD_TPP 75 324 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0093 Lele-ChrLele38 713466 716002 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0093 70 332 Trehalose Biosynthesis Gene Families AT1G70290 25.000 1.50e-07 51.2