Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0088 ATGGAGGCCCTCAATGCTGCTACCTTGACCCCTTTATCATTGCTCTGCGATAGAAGAAAACAACCCAGAAAATTCTCTTCACTACCCAGAATTTCCGCTAGCAAAGTCTCCGATTCTGCCAGTTTTCCCTCCAATAAACCATCTCTGAATGGGGATTTCCCTGGAGGTTTACGTGGGGGCCTTCTTCTTGCAGCTTCAGTCATCAATGGAGGAATCGCTAAAGCTCTAACATATGAGGAGGCATTGGAGCAATCTGTGGGAAGCCCTACTATTTCTGGGGATTTTGATGTAAATGGGGCTATAGATAGTGTCATAAGTTTTGGAACAGATAACGCTTTGATTATAGCTGGAGGGTTAGCTATTTTGGGGGTGCCTCTGGTTTTGTCTCAGGTTCTGAACAAGCCTAAGCCATGGGGTGTTGAGTCAGCTAAAAATGCATATGCAAAGCTTGGTGCTGATGGGGATGCTCAGTTGCTTGATATAAGAGCACCGACAGAGTTTAGGCAAGTGGGTACTCCAGATGTTGGTGGTTTGAAGAAGAAGGCCGTGTCAGTCACTTACAAAACTGATGATAAACCTGGGTTTCTGAAGAAGCTGGCTTTGAAGTTTAAGGAACCAGAAAATACTACATTGTTCATTCTGGACAAATTTGATGGGAACTCCGAATTGGTTGCAGAGTTGGTTACAGTCAATGGATTCAAAGCTGCTTATGCAATTAAGGATGGGGCAGAAGGACCGCGAGGATGGATGAGTTGTGGTCTTCCATGGATACCACCAAGGAAAGCTTTGATTTTGGATCTTGGCAACTTGACAGAGTCTATCACTGGTGCAATAGGAGAGACCACTGATGGCTTGGCTCTCACTCTTGGGATCGCTGCAGCTACCGGTTTGGGGCTGTTAGCTTTTACTGAGATAGAAACAATTCTCCAACTTGTAGGTTCTGCTGCCATTGTTCAGTTTGCAAGCAAGAAGCTTCTATTTGCCGAGGATCGAAAGCAAACCGTGAAACAAGTTGATGAGTTCTTGAATACAAAGGTTGCACCAAAGGAGTTCGTTGATGAGATAGCGCAAATTGGAAAGGCTCTTCTTCCAACCTCCACCGATAGTAAGGCTCTTCCCGTGCCAACAGAGACAACACCGGAACCTGCACCAGCTGCAAGCACTGTGCAGAAAGCAGAAGAAGCCTCTCCTGATGCCGTCTCTGAGTCCAAAGTAGATGCAGCAGTAGAGCCCGTTCCTGAAGTAAATTCAGTACCCAAACCTGAAGTTAATGCAGAATCAGTTCCTGGGATCCCAAGACCACTTTCACCATACCCATATTATCCGGATTTCAAGCCACCAACATCTCCCACTCCAACCCAGCCCTAG 1368 0.462 MEALNAATLTPLSLLCDRRKQPRKFSSLPRISASKVSDSASFPSNKPSLNGDFPGGLRGGLLLAASVINGGIAKALTYEEALEQSVGSPTISGDFDVNGAIDSVISFGTDNALIIAGGLAILGVPLVLSQVLNKPKPWGVESAKNAYAKLGADGDAQLLDIRAPTEFRQVGTPDVGGLKKKAVSVTYKTDDKPGFLKKLALKFKEPENTTLFILDKFDGNSELVAELVTVNGFKAAYAIKDGAEGPRGWMSCGLPWIPPRKALILDLGNLTESITGAIGETTDGLALTLGIAAATGLGLLAFTEIETILQLVGSAAIVQFASKKLLFAEDRKQTVKQVDEFLNTKVAPKEFVDEIAQIGKALLPTSTDSKALPVPTETTPEPAPAASTVQKAEEASPDAVSESKVDAAVEPVPEVNSVPKPEVNAESVPGIPRPLSPYPYYPDFKPPTSPTPTQP 455
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0088 455 Gene3D - 138 266 IPR036873 -
Lele38g0088 455 MobiDBLite consensus disorder prediction 366 455 - -
Lele38g0088 455 PANTHER RHODANESE-LIKE DOMAIN-CONTAINING PROTEIN 4, CHLOROPLASTIC 1 455 IPR044240 -
Lele38g0088 455 FunFam Rhodanese-like domain-containing protein 4, chloroplastic 136 267 - -
Lele38g0088 455 MobiDBLite consensus disorder prediction 432 455 - -
Lele38g0088 455 ProSiteProfiles Rhodanese domain profile. 152 258 IPR001763 -
Lele38g0088 455 SUPERFAMILY Rhodanese/Cell cycle control phosphatase 138 258 IPR036873 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0088 Lele-ChrLele38 675543 679211 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0088 1 445 Sulfurtransferasese or Rhodanese AT4G01050 56.159 1.16e-159 459
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele38g0088 38 675543 679211 Lele38g0088 38 675543 679211 ECH
Lele38g0088 38 675543 679211 Lele39g1344 39 21788816 21795312 hybridization
Lele38g0088 38 675543 679211 Lele40g0087 40 638929 642888 hybridization