Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0087 ATGTTGGGATCTAGTATGACACTTCAGGTTCCAGTTTTGGGTAAGCAAATGCGAATTGATACTTGCAGGCATGCTTCTGCTCTGGTTGAGAGTTTGGGATTGGAAGCACTGTTGTTTCTTTCATAAACAGTCATGGCTAAACGTCGCAGAAAGACTAGTAGCTCTTACTCTGAAGAGGTGAGCAGCATTGAATGGGAGTTCATTAACATGACAGAGCAAGAAGAAGATCTAATTCACAGAATGCACAGACTTGTTGGAGACAGGTGGGGACTGATAGCAGGGAGAATTCCAGGAAGAAAAGCTGAGGAGATAGAGAGGTTTTGGATTATGACGTACGGGCAAGTCCTTGCCAGCAAAACAGAACAAACCTCTTAA 375 0.4373 MLGSSMTLQVPVLGKQMRIDTCRHASALVESLGLEALLFLSXTVMAKRRRKTSSSYSEEVSSIEWEFINMTEQEEDLIHRMHRLVGDRWGLIAGRIPGRKAEEIERFWIMTYGQVLASKTEQTS 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0087 124 FunFam MYB-like transcription factor 69 111 - -
Lele38g0087 124 PANTHER TRANSCRIPTION FACTOR MYB51-LIKE ISOFORM X1 69 116 - -
Lele38g0087 124 SMART sant 66 114 IPR001005 -
Lele38g0087 124 SUPERFAMILY Homeodomain-like 71 110 IPR009057 -
Lele38g0087 124 CDD SANT 69 108 IPR001005 -
Lele38g0087 124 Pfam Myb-like DNA-binding domain 70 109 IPR001005 -
Lele38g0087 124 Gene3D - 70 111 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0087 Lele-ChrLele38 670962 675302 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0087 69 123 MYB Transcription Factor Family AT5G14750 47.273 2.82e-14 63.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele38g0087 Myb_DNA-binding 4.1e-06 CL0123