Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0086 ATGGAAGAGGCCATGAAGTGGGAACAATTTAGTCTGATCAATGAGCTAATCCAAGGGAAGGAGTTTGCGGAGCAGCTCTGTTCCCATCTTTCTTCTTCCTCGTCTCTTCACGAGAAGGAGGTCTTAGTAGAAAAGATTCTTTCATCCTATGAGAAAGCTATGTCCTTGCTTAATAGGGGAGCTAATGTGGGAGACACTGGCGTCATCAACGGCAAGATGATGATAGACTCTCTCTGTTCGTTCATTGGTGGCAGCCCCAAAAGTGAGGGGTTGGACCGAGATTTTAACCACAAGAAAAGAAAGAGCATGCCCAGATGGACAAAGCAAGTGAAGGATTGCCCAGAAACAGGGCTTGAAGGATCTCAGGATGACGGTTATAGCTGGAGAAAAGGATATTACAGATGTACCCACAGAAATGTACAAGGTTGTCTGGCTACAAAGCAAGTTCAAAGATCTGATGAAGACCCAACGATTCTTGAGATAACCTACAGAGGAAGACACACATGCACTCAGGCATCTCATGTGAAGAAGAAGACATTACCATTAAAAAGAAAGATGGCTTTCATGGAAAATACAATGCAGAACCATCAAAATGAACAGAAACCACTGGAACCAATAAACCCAGAAGTGTTTTTAAATGTTGGAAATGAGTTTGAAGTGAAAACAGAGGATGATGCAAAGGAGGAAATTTTCCAACCCTTTTGCTTCACTTCTGCTTTAATAGGATCTGAGAATGAAGACAACCTATTATTCTCCGAGCCCATGATGCAAAACCATCATTTCCTGGAAAGCTTGTCTCCTCCTCCTCCTAAGTTTATCTCACCAGCAACCTCGGAATCAAACATATTCTGTCTGAATGTGCAGACTTCAGAATCTGATGTCACTGACATAGTTTCAGCTCCAACTTCAGTCACCAATTCGCCAATAGCTGATTTGGATCTCTTAGATTTTGAGTCCAATTTCCCTTTCAACGAACTATTTTCCTCATAA 990 0.4202 MEEAMKWEQFSLINELIQGKEFAEQLCSHLSSSSSLHEKEVLVEKILSSYEKAMSLLNRGANVGDTGVINGKMMIDSLCSFIGGSPKSEGLDRDFNHKKRKSMPRWTKQVKDCPETGLEGSQDDGYSWRKGYYRCTHRNVQGCLATKQVQRSDEDPTILEITYRGRHTCTQASHVKKKTLPLKRKMAFMENTMQNHQNEQKPLEPINPEVFLNVGNEFEVKTEDDAKEEIFQPFCFTSALIGSENEDNLLFSEPMMQNHHFLESLSPPPPKFISPATSESNIFCLNVQTSESDVTDIVSAPTSVTNSPIADLDLLDFESNFPFNELFSS 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0086 329 ProSiteProfiles WRKY domain profile. 125 167 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele38g0086 329 Gene3D WRKY domain 100 164 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele38g0086 329 PANTHER WRKY TRANSCRIPTION FACTOR 30-RELATED-RELATED 8 288 IPR044810 GO:0003700
Lele38g0086 329 SUPERFAMILY WRKY DNA-binding domain 122 171 IPR036576 GO:0003700|GO:0006355|GO:0043565
Lele38g0086 329 Pfam WRKY DNA -binding domain 130 169 IPR003657 GO:0003700|GO:0006355|GO:0043565
Lele38g0086 329 SMART WRKY_cls 122 171 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0086 Lele-ChrLele38 658816 660695 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0086 3 172 WRKY Transcription Factor Family AT4G23810 36.574 9.23e-39 138
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Lele38g0086 WRKY 1e-11 CL0274