Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0083 ATGCTGGATCCCCATCACCACCACGAGCGACCAGCTTCTACAATCTGTTTTGTTCTATCTATGGAGCAATTTCGACATGTGGGGGAGGCACTGGGAGGTTTGAAGGCGTTGATGGTGTTCAGAGAGAACATTGAATTCAATCAGAGACAGTGTTGTTTGTTGCTGGACGTGTTCACATTTGTGTATGATTTGATTTCTGAGGAGATTACTCAGAACCTGATATTCACAGAGAAGTACACAAAGTGGAAAGTTCTTGAACAGCCCTTGAAAGAGATTCACAAGATTTTCAAAGAAGGAGAAGCTTACATCAAGCGATGCTTAGAAAGTGAAACAAAGAACTGGTGGGCGAAAGCCATGATACTCTGCAAGAACAAAGATTGTGTTGAGTTCGACCTCCACAATTTGCTCTCATGCATCCCCATCGTCATTGAAGCAATTGAATCTGCAGGAGAAATAGCTGGGTGGGATCATGAAGAGATGGAAAGGAAGAAGCTTATCAACTCTAACAAGTATAGGAAAGAATACAGAGACATGAGCCTTTTCCAGTGGAAATTTGGGAAGCAGTACCTAATTACTCAGGACTTCTGCAACCGGTACGACACGGTTTGGAAGGAAGATAGATGGTTTCTTCTCAACAAAATACGCGAAAAGAAACTGGCAATGTCCACAAAGTTTGAGAATCAATTAACAGATGTTTTTTTGAAACAATTAGAAAAATCAGGATCATTGGATGTGGAGCTACTTCCTAGTTCAATTTTGGTTGGGTCTAAGGACTACCACGTGAGGAGGAGACTAGGGAATGGGAGAATGTACAAGGAGGTCATTTGGTTAGGTGAAAGCTTTGTTGTCAAGCATTTTTTTGGGGACATAGAAGCAATGGAACCAGAAATCACTTCCCTTTTATCTCTTTCACACCCAAATATAATTGAATGCCTTTGTGGATTTTGTGATGAGGAGAAGAAAGAGTGTTTTCTGCTAATGGAACTGATGAACAGAAACCTTTGCACACACATTAAAGAAGTATATGGCCCGAAAAAGCGAGTCCCGTTTGCACTTCCTGTAGCAGTTGATCTCATGCTTCAAATTGCCAGGGGAATGGAATACCTGCACTCAAAGAAAATATATCATGGGGAGCTAAATCCTTCAAACATTCTTGTTAAACCCAGAGGTACATCCACAGAAGGCTTCTTGTATGCCAAGGTTTCAGGGTTTGGCCAAGTTGGTTTTAAGAACTTGAAACAAAAGGGGACCTCAAATCTGAATGAAACCCTACCATTAATCTGGTATGCTCCCGAAGTTCTTGAAGAGCAAGAACAGACAGGAGAAAATACAGTAAACTCCAAGTATACAGAGAAATCTGATGTGTACAGTTTTGGAATGGTTTGCTTTGAGCTTCTAACTGGCAAAGTCCCTTTTGAGGATAGTCATCTTAAAGGGGACACAATGAGTAGAAACATTAGGGCAGGCGAGAGACCCCTTTTCACATACAGTTGTCCAAAATATGTTACTAACTTGACTAAGAAATGTTGGAATGCTGATCCAAATCAAAGGCCAAGCTTCTCCTCCATTTGTAGAATTCTTCGGTATATAAAACGGTTTCTTGCAATGAATCCTGATTTCAATAGCCAACTAGACCCACCAGTGCCACCAGTAGATTACTGTGATATAGAGTCAACAATATTGAGAAAGTTCCCTTCTTGGGGAAGTTCCAATGCATCACCAATATATCAAATCCCATTTCAAATGTTTGCCTATCGAGTCATAGAAAAAGAAAAAACAAGTTTAGGTTCCAATTATAATTCTGAATCAGGAAGTGAGGCTTCAGCCTGTGGTGATGAACTTGCTACTTCTGGGGAGGAACTATATCCATCAAGAACTGATAAGAAGTATTTAGTTGGGCCTGACGATGTGACTATGAACAGAAGACATTTGTTATCAAGGAGATCCTTTGATGAAAGAACCAGCGGACAACCAGGTACGCCAAAGGTACGATCTGCTTCTGCTAGACCTCCACAGATGACTTTATCTGGGCGAAGCACGAGGATCAAATCAGGGACTCCATCGTTGACGCCAAGTCCGAGAATTAGAAGGACAAACTCTGGTCATGTCTCGGATTCTGAGCTTTCTATATCACGGCACACCACCAAGAGATTCTCAAGATAA 2163 0.4133 MLDPHHHHERPASTICFVLSMEQFRHVGEALGGLKALMVFRENIEFNQRQCCLLLDVFTFVYDLISEEITQNLIFTEKYTKWKVLEQPLKEIHKIFKEGEAYIKRCLESETKNWWAKAMILCKNKDCVEFDLHNLLSCIPIVIEAIESAGEIAGWDHEEMERKKLINSNKYRKEYRDMSLFQWKFGKQYLITQDFCNRYDTVWKEDRWFLLNKIREKKLAMSTKFENQLTDVFLKQLEKSGSLDVELLPSSILVGSKDYHVRRRLGNGRMYKEVIWLGESFVVKHFFGDIEAMEPEITSLLSLSHPNIIECLCGFCDEEKKECFLLMELMNRNLCTHIKEVYGPKKRVPFALPVAVDLMLQIARGMEYLHSKKIYHGELNPSNILVKPRGTSTEGFLYAKVSGFGQVGFKNLKQKGTSNLNETLPLIWYAPEVLEEQEQTGENTVNSKYTEKSDVYSFGMVCFELLTGKVPFEDSHLKGDTMSRNIRAGERPLFTYSCPKYVTNLTKKCWNADPNQRPSFSSICRILRYIKRFLAMNPDFNSQLDPPVPPVDYCDIESTILRKFPSWGSSNASPIYQIPFQMFAYRVIEKEKTSLGSNYNSESGSEASACGDELATSGEELYPSRTDKKYLVGPDDVTMNRRHLLSRRSFDERTSGQPGTPKVRSASARPPQMTLSGRSTRIKSGTPSLTPSPRIRRTNSGHVSDSELSISRHTTKRFSR 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0083 720 ProSiteProfiles Protein kinase domain profile. 259 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0083 720 SUPERFAMILY Protein kinase-like (PK-like) 253 556 IPR011009 -
Lele38g0083 720 FunFam Kinase family protein 256 540 - -
Lele38g0083 720 Pfam Protein of unknown function (DUF1221) 41 256 IPR010632 -
Lele38g0083 720 MobiDBLite consensus disorder prediction 651 708 - -
Lele38g0083 720 PANTHER SERINE-THREONINE PROTEIN KINASE 296 532 - -
Lele38g0083 720 MobiDBLite consensus disorder prediction 641 720 - -
Lele38g0083 720 Gene3D Transferase(Phosphotransferase) domain 1 245 541 - -
Lele38g0083 720 Pfam Protein tyrosine and serine/threonine kinase 291 526 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0083 Lele-ChrLele38 642056 645011 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0083 296 527 MAP Kinase Kinase Kinase AT1G62400 30.672 9.65e-25 105
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_Gdt Lele38g0083 PK_Tyr_Ser-Thr 2.3e-39 CL0016