Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0071 ATGGGAAACAGTGAGGAAGGGAAATCAACTAAAACTGAAAAACCTTCTTCACCTGTAGCAGTGGACCAGGCTAATCAGGGCAGCCAGACCAACATTCATGTCTATCCTGATTGGGCAGCCATGCAGGCATATTATGGGCCCAGAGTCTCCATGCCTCCATACTACAACACAGCTGTGAGTTCTGGTCACCCTCACCCATACATGTGGCCACCACAGCCTATGATGCCACCACCATATGGGACTCCTTACGCAGCAATTTATTCACATGGAGGTGTTTATCCTCACCCTTCAATTCCTATAGCACCACAATCACATGGTCAAGGAGTTCCAACTTCACCTGCAGCTGTAACTCCTTTGAACATGGAGGCACCAACGAAATCTTCTGGAAACAGTGATCAGGGTTTAATGAAGAAACTGAAGGGGTTTAATGGGCTAGCAATGTCTATTGGAAATGGCAATGCTGAAAGTGCTGACCGTGGAGCAGAAAACAGGCTGTCACAGAGTTTGGATGATGAGAGTTACAGTGATGGAAGTGACAGCAACACTGCAGGGGCTAATCAAGCAAGAAGGAAAAGAAGCCGTGAGGGAACACCAGGTACTGATGGAGATGGCAAAATTGGTAGACAAGCAAATCCAGTTTCCAAAGCAGCTGGAGCCACCACTAAGATGACATCAATTGCCCCTGCCAATGTTGTTGGAACAGTTGTTGGACCTGTAATTTCTTCTGGTACGTCAACAGCGTTGGAGCTGAGGAAAACGGATTCCCCGAGTAATCCACAGCCTTGTGCAGTAGTGCAACCTGAAGCTTGGATACAGAATGAACGTGAGCTGAAACGGGAGAAGAGAAAGCAATCAAATCGGGAATCTGCTAGACGGTCCCGGTTAAGAAAGCAGGCTGAGACTGAAGAACTTGCCCGAAAAGTTGAATCCTTGACATCTGAGAATATCACACTGAAATCAGAAATAAACCGGTTGACCGAAAGTTCAGGAAAGCTTAAGATGGAAAATGAGACATTAATGGAAAAACTGAAAAATGCGCGAGGAGAAAAGGATGAAATCATTTTGACACCGAGTACAGAAAATTTGCTATCCAGGGTTAACAATTCCAGTTCTTGTGACAATAGAACTATAGAGGGTGAGAAGAAGCCAAACTCAGGAGGAGCAAAGCTGCATCAACTATTGGACACTAGTCCTAGAACTGATGCTGTGGCAGCTGGCTGA 1221 0.4586 MGNSEEGKSTKTEKPSSPVAVDQANQGSQTNIHVYPDWAAMQAYYGPRVSMPPYYNTAVSSGHPHPYMWPPQPMMPPPYGTPYAAIYSHGGVYPHPSIPIAPQSHGQGVPTSPAAVTPLNMEAPTKSSGNSDQGLMKKLKGFNGLAMSIGNGNAESADRGAENRLSQSLDDESYSDGSDSNTAGANQARRKRSREGTPGTDGDGKIGRQANPVSKAAGATTKMTSIAPANVVGTVVGPVISSGTSTALELRKTDSPSNPQPCAVVQPEAWIQNERELKREKRKQSNRESARRSRLRKQAETEELARKVESLTSENITLKSEINRLTESSGKLKMENETLMEKLKNARGEKDEIILTPSTENLLSRVNNSSSCDNRTIEGEKKPNSGGAKLHQLLDTSPRTDAVAAG 406
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0071 406 Pfam bZIP transcription factor 274 337 IPR004827 GO:0003700|GO:0006355
Lele38g0071 406 PANTHER G-BOX-BINDING FACTOR 3-RELATED 1 380 IPR044827 GO:0003700|GO:0006355|GO:0043565
Lele38g0071 406 MobiDBLite consensus disorder prediction 247 262 - -
Lele38g0071 406 FunFam G-box binding factor 3 277 332 - -
Lele38g0071 406 SUPERFAMILY Leucine zipper domain 277 332 IPR046347 GO:0003700|GO:0006355
Lele38g0071 406 Pfam Disordered region downstream of MFMR 132 256 - -
Lele38g0071 406 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 281 296 IPR004827 GO:0003700|GO:0006355
Lele38g0071 406 SMART brlzneu 274 338 IPR004827 GO:0003700|GO:0006355
Lele38g0071 406 MobiDBLite consensus disorder prediction 272 306 - -
Lele38g0071 406 Coils Coil 294 356 - -
Lele38g0071 406 MobiDBLite consensus disorder prediction 13 31 - -
Lele38g0071 406 MobiDBLite consensus disorder prediction 160 187 - -
Lele38g0071 406 Pfam G-box binding protein MFMR 1 99 IPR012900 -
Lele38g0071 406 CDD bZIP_plant_GBF1 279 327 IPR045314 GO:0003700|GO:0006355
Lele38g0071 406 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 276 339 IPR004827 GO:0003700|GO:0006355
Lele38g0071 406 MobiDBLite consensus disorder prediction 153 233 - -
Lele38g0071 406 Gene3D - 277 349 - -
Lele38g0071 406 MobiDBLite consensus disorder prediction 1 31 - -
Lele38g0071 406 MobiDBLite consensus disorder prediction 214 228 - -
Lele38g0071 406 MobiDBLite consensus disorder prediction 247 306 - -
Lele38g0071 406 MobiDBLite consensus disorder prediction 365 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0071 Lele-ChrLele38 517454 521031 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0071 1 406 bZIP Transcription Factor Family AT2G46270 51.456 1.88e-114 337
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Lele38g0071 MFMR_assoc 3.6e-17 No_clan