Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0059 ATGGCTAATCCTTCGCTTCTCCAGTCCTCAACGTCGTCGTTTATGGGTCAATTTCGAGTCTTTCCGGCTCCATTGTCCTCCGGACTTCTCTACAGAAATGGGAATGCAGGCGCGGTGGCGCCGGTGAAGGCCACTGCTTCTGAGTCCGGGGTTGTATTGGTGGAGAAGTCTGAGGCAGAGAAACCCCACCGGCTCAAAATAACTTACACTGAGAAAATTGTTCCTTTGCTCATGGAAGAATTCAACTACACCAATATACACGAGGTCCCTAAAATTGAGAAGGTCGTTGTTAATTGCGGTATCGGAGATGCTGCACAAAATGCAAAGGGTTTGGAGGCAGCAATGAATGATCTAGCACTCATCACAGGGCAGAGGCCTGTTAAGACACGGGCGAGGGCTTCAGTTGCCACGTTCAAGATCAGGGAAGGCCAACCCCTTGGGATTGCTGTGACACTCAGAGGACAAATGATGTTCTCATTCCTAGACCGACTTGTCAACTTGGGGCTTCCTAGGACAAGGGATTTCCAAGGTGTCAACCCCAACAGTTTCGATGGGCACGGGAATTACAGCGTCGGCATCAAGGACCAGAGTGTGTTCCCAGAAATCAGGTCTGATATCGTGAGTAAGCCTAGAGGAATGGATGTATGCATAACAACAACGGCGAAAACTGATCAAGAAGCAAGCAGATTACTGGTTCTCATGGGCATGCCATTCAGAGAGGGAGGTGGCCCTGCTGCAACAATTCGCAAAAAGAAGCTGAAGTCCCACCATTTTGACTCAAAATCAAAGGGCAAAGGAAGGAGGTGA 807 0.4932 MANPSLLQSSTSSFMGQFRVFPAPLSSGLLYRNGNAGAVAPVKATASESGVVLVEKSEAEKPHRLKITYTEKIVPLLMEEFNYTNIHEVPKIEKVVVNCGIGDAAQNAKGLEAAMNDLALITGQRPVKTRARASVATFKIREGQPLGIAVTLRGQMMFSFLDRLVNLGLPRTRDFQGVNPNSFDGHGNYSVGIKDQSVFPEIRSDIVSKPRGMDVCITTTAKTDQEASRLLVLMGMPFREGGGPAATIRKKKLKSHHFDSKSKGKGRR 268
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0059 268 Pfam ribosomal L5P family C-terminus 145 238 IPR031309 -
Lele38g0059 268 PANTHER 60S RIBOSOMAL PROTEIN L11-RELATED 68 241 IPR002132 GO:0003735|GO:0005840|GO:0006412
Lele38g0059 268 Gene3D - 56 240 IPR022803 -
Lele38g0059 268 MobiDBLite consensus disorder prediction 249 268 - -
Lele38g0059 268 SUPERFAMILY RL5-like 64 239 IPR022803 -
Lele38g0059 268 Pfam Ribosomal protein L5 85 141 IPR031310 -
Lele38g0059 268 ProSitePatterns Ribosomal protein L5 signature. 118 134 IPR020929 GO:0003735|GO:0005840|GO:0006412
Lele38g0059 268 Hamap 50S ribosomal protein L5 [rplE]. 62 240 IPR020930 GO:0003735|GO:0005840|GO:0006412
Lele38g0059 268 FunFam 50S ribosomal protein L5 60 240 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0059 Lele-ChrLele38 400673 402770 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0059 91 218 Cytoplasmic Ribosomal Protein Gene Family AT5G45775 27.344 1.08e-06 46.2