Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0057 ATGGTTTTCAACTTTTCGTCTCCAATGTCAAATTTTTGTGCCTGGGAAGCCTCTGCTTTAATTAGATCTAATTGCCTTTCCCTTGCTCCTCAGAAAAATATAACAGAAACAAAGGATTACGTCACTGACAGATCAGCATTGGCATCACCACTCCTATCTCTGCTTGCTAGCCTGTCCACTGTCCACGCTCCTCTGAGCTGCATTGTGTTTCTTTCTTTCTTACACAACACCCTCTCACTCTTCTTTCCCTCTCTATCCCGCATTTACTTCTCACTTCTCTCCTCCTTCATTCCCATTCAAAATTTCAACCTTCTGTTCTGTCTCTCTCTGATTCTCTCTTTCTTCTCCATCACCCATGAGAGCTGTGATCATCAACTCCAGAAAAGCTTCTTTCTTTTAGGATTCTTCTGGCAAAAGAAATGGGGCCCAGATTCTAGAACCTCTGCGACGTGTATCGCAGCAGCAATAATGTCAGTCTACGATGCAGCTTTCGTGGAAACAGAGCTCTCCAAGAAGACCTCAATCTTTGGCCTCCGACTATGGCTTGTAATCGGAATCCTCGTCGGTTCTATTATCGTGCTCACTCTCTTCCTGCTCTCGCTCTGCCTCACCTCTCGCCGCCAGAGACGTAAAGAAACTCCTCAAGCCAACAAAACCCCTGTCGTTTCGAAGGAAATCCAAGAGATCGTGCACCTGCCCGCACCCAATCAGCACTCAGTCCCCGAGATCCAAGTGGATATCGGGAAAGCGGAGCACCGTGTCGTGGTTTACTCCGATCGGGTCTCTAGTGGAGAGAGCAAGGGAGGTGCCACCAGTGTGTGTGAAACGACGTCCTCTTTTGGTAGTGGGAGTATTGGTCCTGAGGTTTCGCATCTTGGTTGGGGAAGATGGTACACCTTAAGGGAGCTGGAGGCTGCAACTAACAATCTCTGTGAAGAGAATGTTATTGGGGAAGGTGGGTACGGCATCGTTTACCATGGAGTGCTTGGTGATGGTACAAGAGTTGCAGTGAAGAACCTTTTGAATAACAAGGGTCAAGCTGAGAGAGAATTTAAAGTAGAGGTAGAAGCAATTGGTCGTGTGCGCCACAAGAATCTTGTTAGGTTGCTTGGCTACTGTGTTGAGGGGGCATACAGGATGCTTGTGTATGAGTATGTTGATAATCGCAATTTGGAACAGTGGCTTCATGGGGATGTTGGAGCTGTTAGCCCTTTGACATGGGATATACGGATGAACATTATATTGGGAATTGCAAAGGGATTGGCCTATCTTCATGAGGGTCTTGAACCGAAGGTTGTCCACCGAGATGTGAAATCTAGCAACATACTCCTTAATCGGCAATGGAATGCCAAGGTTTCAGATTTCGGACTGGCTAAACTATTGTGTTCTGAGCGGAGTTATGTCACCACCCGAGTAATGGGGACATTTGGTTATGTTGCTCCAGAATATGCCTGCACTGGTATGTTGACTGAGAAGAGCGATGTTTATAGCTTTGGAATACTTATCATGGAGATAATTTCTGGGAGAAGTCCTGTTGATTATAGTAGACCACAAGGAGAGGTAAATCTAGTAGAGTGGTTGAAGACAATGGTTGGGAATCGAAAATCTGAGGAGTTAGTTGATCCTAAACTCCCTGAGATGCCATCTTCAAAGGCTCTTAAGCGTGCTCTGTTGGTTGCTCTTCGATGTGTTGATCCTGATGCAACAAAAAGGCCTAAAATGGGACATGCCATCCACATGCTTGAGGCAGACGACCTCTTGTTCCGTGATGTAGATTCTGAACGCCGGATTGAAGGAGAATCTTCCAGCAACTCTCATCGGGATTCGATACAAGAGCATAAGGACTCAAATTCTGATAAAAAGCTTGTAGGCAGAGGTACCACTAATCAACCTCAACCTCAAGATGACTATAGTAGGAATCAGCATCAACCCATCAGCAACGTCTATGCCAAATTGAAGAACACAAGAGAGTTCATTCGGAGTTCAAAATCACAATTCACAGATACCACACCGATCATCCACAAAAAGATCAGTAAAGTTACACTTGAATTCACGGGTCATCAAGCGTTTTCCAGTTCAAAAGTTCACAAGCCTCCCATACACTTCTCTCCCCACCTACCAATACCAACGCGTCAATTTCTGCTCCTCTCCCTTCTTCTCCCTCAAATCTTACTTTCTTGTGTTTGGACCTCAAAGAGGCCGTTTTTGCCAGACATGTCTCTGGAGTCAGCCTCTGCTTCTTCTGATCATAATATCAGAGGCGTGCCCACCCATGGTGGACGCTACGTTCAGTATAATGTGTTTGGTAATCTCTTCGAGGTCTCAAGGAAGTATGTCCCTCCGATTCGGCCCGTAGGCAGAGGCGCTTACGGTCTCGTTTGTGCTGCTGTGGATGCGGAGACACGTGAGGAAGTTGCCATTAAGAAGGTTGGCAATGCATTTGACAACAGAATAGATGCCAAAAGGACCTTACGAGAAATTAAACTTCTTCGACACATGGATCATGAAAATGTGATGGCCCTCAAAGACATTATACGACCTCCACAGAGGGAGAACTTCAATGATGTATACATGGTTTATGAATTAATGGACACTGATCTGCATCAAATAATACGTTCCAATCAACCATTGACTGATGATCATTGTCGGTATTTCCTGTATCAGTTGTTGCGGGGTCTAAAATATGTACATTCAGCAAGTGTTTTGCACCGTGATCTAAAGCCTAGCAATTTGCTCTTGAATGCCAATTGTGACCTTAAGATCGGAGACTTTGGTCTTGCTAGAACTACATCTGAAACTGATTTTATGACTGAGTACGTGGTTACTAGATGGTACCGAGCTCCAGAATTGCTCCTTAATTGTTCAGAATACACTGCAGCCATTGATATATGGTCTGTGGGTTGCATCCTTGGTGAAATCATGACAAGACAACCTCTTTTCCCTGGTAAAGATTATGTTCATCAGTTGAGACTGATCACAGAGCTCATAGGGTCACCTGATGATGCCAGCCTGGGATTTCTACGAAGTGATAATGCCCGTAGATATGTAAGACAGCTTCCACAATATCCCAAACAACAGTTTTCTTCTAGATTCCCAAACGTATCTCCTGGTGCTGTTGATTTGCTGGAGAAGATGCTTATCTTTGATCCAAACAGGCGTATTACAGTTGATGAGGCTCTGTGTCATCCGTACTTGGCACCTCTCCATGATATCAATGAGGAACCTGTTTGCCCTAGACCTTTCAGTTTTGATTTTGAGCAACCAACATTCACTGAAGAAGATATCAAGGAACTTATCTGGAGAGAATCTGTGAAGTTCAACCCTGATCCCCCAATTCACTGA 3342 0.4485 MVFNFSSPMSNFCAWEASALIRSNCLSLAPQKNITETKDYVTDRSALASPLLSLLASLSTVHAPLSCIVFLSFLHNTLSLFFPSLSRIYFSLLSSFIPIQNFNLLFCLSLILSFFSITHESCDHQLQKSFFLLGFFWQKKWGPDSRTSATCIAAAIMSVYDAAFVETELSKKTSIFGLRLWLVIGILVGSIIVLTLFLLSLCLTSRRQRRKETPQANKTPVVSKEIQEIVHLPAPNQHSVPEIQVDIGKAEHRVVVYSDRVSSGESKGGATSVCETTSSFGSGSIGPEVSHLGWGRWYTLRELEAATNNLCEENVIGEGGYGIVYHGVLGDGTRVAVKNLLNNKGQAEREFKVEVEAIGRVRHKNLVRLLGYCVEGAYRMLVYEYVDNRNLEQWLHGDVGAVSPLTWDIRMNIILGIAKGLAYLHEGLEPKVVHRDVKSSNILLNRQWNAKVSDFGLAKLLCSERSYVTTRVMGTFGYVAPEYACTGMLTEKSDVYSFGILIMEIISGRSPVDYSRPQGEVNLVEWLKTMVGNRKSEELVDPKLPEMPSSKALKRALLVALRCVDPDATKRPKMGHAIHMLEADDLLFRDVDSERRIEGESSSNSHRDSIQEHKDSNSDKKLVGRGTTNQPQPQDDYSRNQHQPISNVYAKLKNTREFIRSSKSQFTDTTPIIHKKISKVTLEFTGHQAFSSSKVHKPPIHFSPHLPIPTRQFLLLSLLLPQILLSCVWTSKRPFLPDMSLESASASSDHNIRGVPTHGGRYVQYNVFGNLFEVSRKYVPPIRPVGRGAYGLVCAAVDAETREEVAIKKVGNAFDNRIDAKRTLREIKLLRHMDHENVMALKDIIRPPQRENFNDVYMVYELMDTDLHQIIRSNQPLTDDHCRYFLYQLLRGLKYVHSASVLHRDLKPSNLLLNANCDLKIGDFGLARTTSETDFMTEYVVTRWYRAPELLLNCSEYTAAIDIWSVGCILGEIMTRQPLFPGKDYVHQLRLITELIGSPDDASLGFLRSDNARRYVRQLPQYPKQQFSSRFPNVSPGAVDLLEKMLIFDPNRRITVDEALCHPYLAPLHDINEEPVCPRPFSFDFEQPTFTEEDIKELIWRESVKFNPDPPIH 1113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0057 1113 SMART serkin_6 310 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0057 1113 SMART serkin_6 779 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0057 1113 FunFam Mitogen-activated protein kinase 863 1092 - -
Lele38g0057 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 432 444 IPR008271 GO:0004672|GO:0006468
Lele38g0057 1113 FunFam Mitogen-activated protein kinase 764 873 - -
Lele38g0057 1113 SUPERFAMILY Protein kinase-like (PK-like) 288 582 IPR011009 -
Lele38g0057 1113 ProSitePatterns Protein kinases ATP-binding region signature. 785 809 IPR017441 GO:0005524
Lele38g0057 1113 Gene3D Transferase(Phosphotransferase) domain 1 863 1092 - -
Lele38g0057 1113 MobiDBLite consensus disorder prediction 596 621 - -
Lele38g0057 1113 Gene3D Transferase(Phosphotransferase) domain 1 386 594 - -
Lele38g0057 1113 FunFam Probable serine/threonine-protein kinase At1g01540 290 385 - -
Lele38g0057 1113 Gene3D Phosphorylase Kinase; domain 1 762 1102 - -
Lele38g0057 1113 CDD STKc_TEY_MAPK 772 1108 - -
Lele38g0057 1113 ProSiteProfiles Protein kinase domain profile. 310 587 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0057 1113 ProSitePatterns MAP kinase signature. 814 917 IPR003527 GO:0004707|GO:0005524|GO:0006468
Lele38g0057 1113 ProSiteProfiles Protein kinase domain profile. 779 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0057 1113 MobiDBLite consensus disorder prediction 622 642 - -
Lele38g0057 1113 PANTHER OS01G0323000 PROTEIN 163 610 - -
Lele38g0057 1113 CDD STKc_IRAK 316 582 - -
Lele38g0057 1113 SUPERFAMILY Protein kinase-like (PK-like) 782 1072 IPR011009 -
Lele38g0057 1113 ProSitePatterns Serine/Threonine protein kinases active-site signature. 901 913 IPR008271 GO:0004672|GO:0006468
Lele38g0057 1113 FunFam Putative receptor-like serine/threonine-protein kinase 386 597 - -
Lele38g0057 1113 Pfam Protein kinase domain 313 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0057 1113 Pfam Protein kinase domain 783 1065 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0057 1113 ProSitePatterns Protein kinases ATP-binding region signature. 316 338 IPR017441 GO:0005524
Lele38g0057 1113 Gene3D Phosphorylase Kinase; domain 1 292 385 - -
Lele38g0057 1113 MobiDBLite consensus disorder prediction 596 642 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0057 Lele-ChrLele38 379472 390013 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0057 316 512 MAP Kinase Gene Family AT4G01370 31.250 4.89e-13 70.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-V Lele38g0057 Pkinase 9.2e-69 CL0016