Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0042 ATGGGGGAATTTGTAGGAGAGCCTAACCCTGGGGTGATTGAAGAGAAAATCTATGTTGCTGTGTCTAAAGATGTGAAAGAGTGCAAATTAAATCTGATATGGGCGATACAAAATTCTAGGGAAAAGAAGATTTGCATCCTTCACGTCCATGAGCCTGCAACAATGATCCCCTTGATGGGCGCAAAGTTTCCAACAAGTGCACTGAAAGACCAGGAAGTTGAAGCATATAGGGAAACAGAAAGGCAAAACATGCATAAAATTCTGAATGAGTATCTTCTGATTTGTCAGCGGATGGGGTTGCGAGCAGAGAAACTGCATATTGAACGGGATTGCGTTGAGAAAGGAATCGTGGAACTTGTGTCAGAGTATGACATCCGGAAGCTTGTTATGGGAGCAGCATCTGATAAGTACTATTCTAGGAAAATGATGGACTTGAGATCTCAGAAAGCCATCTACGTACGAGAACAAGCTTCAGCTTCTTGTCATATACAATTTATCTGCAAAGGGCACCTTATATACACAAGGTACAGTAGTTTGGACAAAAGTAAAGTAGAGGCTGCATCTCCTGTCTCACAGCAAAGGTCACAACCTAATGCTGGACGAGCACCCCACTTGAGATCTCAATCTATTGAACTTGGACGGAATCGTTGTGTAAGACTCACAAATCCAGCTCAAGATCTATTCCGAAGAGTGAGGTCTGGCAATGCTAGACATGAAGGGAACATGGCAACTATTTCTTCTCCAGATGACACTGAGGGATTGTCAAGTCCACATATCAGGTTGGGTATAGAAGTGAGTTCTGATGAGTCAGAAGGACTGTCTGGAAGGAGTCCTTCAGTTGTCTCAACATTCTCTGATAGCGGTGCAGTTGAAGCAACATTGACCCCAGATTTGATCACTGAGCGGATTGAGAATGTATTAGACTTGAGTGGACAATCTTCAATTAAGGGGGATCTTTCTCATTCATCTCCCAGTGTACTGGATGGAGGAATGGACTATAACCTCTATGATCAACTTGAACAAGCCATGGGCGAGGCTGAAAATGCTAGGCAGGATGCATACCAAGAAACTGTTAGACGAGGGAAAGCTGAAAAAGATGCCATTGATACTATACGCAGGGCTAAAGCCTCTGAAATCTCATATACAGAGGAGTTGAAAGTGAGGAAAGAGGTAGAGGAAGCATTGGCAAAAACAAAGGAAGAACTTGGACAGATGAAGATCCAAAGAGATAAAGTAAATGAAGAACTCCGGCTTGCCTTTGATCAGAAATCATCACTAGAGAGTCAAATTTCATCATCAGAACTAATGGTAAAGGAGTTGGAGCAGAAGATTATCTCTGCTGTGGGTTTGTTGCAAAGTTACAAGAAAGAACGTGATGAATTGGAGGTGCAGCGTGATAATGCATTGAGGGAGGCTGAAGAGTTGAGGAAAAAACCAGCTGAGGCCCCAGATACATGTGTGCCTCAATTTTTCTCAGAATTCTCTTTCCCAGAGATTGAAGAAGCAACAGATAGTTTTAATCCATCCCTAAAGATTGGAGAAGGTGGATATGGAAGTATATATAAAGGTATGCTACGTCACACTGAGGTGGCTATCAAAAGGTTGAACTCTAACAGTTTGAAAGGGCCTTCAGAGTTTCAAAAGGAGGTTGACATATTGAGTAAGTTAAGGCATCCCAATTTTATTACATTCATTGGAGCCTGTTCGGAATCCTGGGTTCTTGTCTATGAGTATTTACCCAATGGAAGCCTTGAGGATCGGCTCATCTGCAAGGATAACACTCCCCCATTATCATGTCAAACTCGAATTCGCATTGCCGCGGAGCTCTGCTCCGCTCTCATCTTTCTTTATTCTAGTAAACCTCACAGCATTGTGCATGGTGACTTAAAACCCTCCAATATACTCCTTGATGAAAACCTTGTTAGCAAGCTTAGTGACTTCGGAACCAGTCGTCTATTATCTCGTCATGGGAGTTCCAGTAACAATACTACAGAGTGCTGGAGAACTGACCCAAAGGGAACTTTTGTCTACATGGATCCTGAATTCCTTGCTTCAGGGGAACTTACTCCAAAGTCAGATATATATTCACTTGGAATCATATTATTAAGATTGTTGACCGGTAGACCAGCCTTGGGAATAAGGCAGGAAGTGAAAAGTGCATTGGATGCTGGAAAGTTGAAATCCCTCTTGGATCCTTTGGCTGGAGACTGGCCATTTGTACAGGCTGAACAGTTGTGCCACTTGGCATTGAGATGTTGTGAGATGAACCGAAAGAGCCGGCCAGACCTGTATTCAGAAATCTGGAGGATTCTAGAACCAATGAGCGCTTCTTCTGGAGGCACAAATTCCTTCAGAATTGGTTCTGGAGGGCTTTACAATACCCCTTCATATTTCATTTGTCCAATCTTCCAGGAAGTCATGCAAGATCCGCATGTTGCAGCGGATGGATTTACATACGAAGCAGAGGCCATACAAGGATGGCTGGACAGTGGTCATGAGGCTTCTCCAATGACAAATGATAAGCTTGCACACTCCAATCTTGTCCCTAACCTTGCCCTTCGCTCTGCAATCCAGGATTGGCTTCAAAATCGCTGA 2595 0.4335 MGEFVGEPNPGVIEEKIYVAVSKDVKECKLNLIWAIQNSREKKICILHVHEPATMIPLMGAKFPTSALKDQEVEAYRETERQNMHKILNEYLLICQRMGLRAEKLHIERDCVEKGIVELVSEYDIRKLVMGAASDKYYSRKMMDLRSQKAIYVREQASASCHIQFICKGHLIYTRYSSLDKSKVEAASPVSQQRSQPNAGRAPHLRSQSIELGRNRCVRLTNPAQDLFRRVRSGNARHEGNMATISSPDDTEGLSSPHIRLGIEVSSDESEGLSGRSPSVVSTFSDSGAVEATLTPDLITERIENVLDLSGQSSIKGDLSHSSPSVLDGGMDYNLYDQLEQAMGEAENARQDAYQETVRRGKAEKDAIDTIRRAKASEISYTEELKVRKEVEEALAKTKEELGQMKIQRDKVNEELRLAFDQKSSLESQISSSELMVKELEQKIISAVGLLQSYKKERDELEVQRDNALREAEELRKKPAEAPDTCVPQFFSEFSFPEIEEATDSFNPSLKIGEGGYGSIYKGMLRHTEVAIKRLNSNSLKGPSEFQKEVDILSKLRHPNFITFIGACSESWVLVYEYLPNGSLEDRLICKDNTPPLSCQTRIRIAAELCSALIFLYSSKPHSIVHGDLKPSNILLDENLVSKLSDFGTSRLLSRHGSSSNNTTECWRTDPKGTFVYMDPEFLASGELTPKSDIYSLGIILLRLLTGRPALGIRQEVKSALDAGKLKSLLDPLAGDWPFVQAEQLCHLALRCCEMNRKSRPDLYSEIWRILEPMSASSGGTNSFRIGSGGLYNTPSYFICPIFQEVMQDPHVAADGFTYEAEAIQGWLDSGHEASPMTNDKLAHSNLVPNLALRSAIQDWLQNR 864
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0042 864 Coils Coil 381 478 - -
Lele38g0042 864 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 793 864 IPR013083 -
Lele38g0042 864 SUPERFAMILY RING/U-box 791 862 - -
Lele38g0042 864 SMART Ubox_2 797 860 IPR003613 GO:0004842|GO:0016567
Lele38g0042 864 PANTHER OS02G0152300 PROTEIN 17 859 - -
Lele38g0042 864 MobiDBLite consensus disorder prediction 185 203 - -
Lele38g0042 864 Pfam Protein kinase domain 510 762 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0042 864 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 33 134 - -
Lele38g0042 864 SUPERFAMILY Protein kinase-like (PK-like) 487 770 IPR011009 -
Lele38g0042 864 ProSiteProfiles U-box domain profile. 793 864 IPR003613 GO:0004842|GO:0016567
Lele38g0042 864 CDD STK_N 16 169 - -
Lele38g0042 864 ProSitePatterns Protein kinases ATP-binding region signature. 512 533 IPR017441 GO:0005524
Lele38g0042 864 Gene3D Transferase(Phosphotransferase) domain 1 579 783 - -
Lele38g0042 864 CDD RING-Ubox_WDSUB1_like 798 839 - -
Lele38g0042 864 SMART serkin_6 506 774 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele38g0042 864 ProSitePatterns Serine/Threonine protein kinases active-site signature. 624 636 IPR008271 GO:0004672|GO:0006468
Lele38g0042 864 Gene3D HUPs 11 134 IPR014729 -
Lele38g0042 864 Coils Coil 336 356 - -
Lele38g0042 864 Gene3D Phosphorylase Kinase; domain 1 486 578 - -
Lele38g0042 864 FunFam receptor-like protein kinase FERONIA 471 578 - -
Lele38g0042 864 MobiDBLite consensus disorder prediction 185 207 - -
Lele38g0042 864 Pfam U-box domain 795 863 IPR003613 GO:0004842|GO:0016567
Lele38g0042 864 ProSiteProfiles Protein kinase domain profile. 506 775 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0042 Lele-ChrLele38 274007 279355 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0042 4 863 U-box Gene Family AT2G45910 54.186 0.0 902
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-IXb Lele38g0042 Pkinase 2e-43 CL0016