Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0037 ATGATCAGCTGCTGCATGAAGATGACCTCTAATCAGAATGATGCTGAGAATGCTTACTCGGATTACAATGACGGCGGCCAGCGGCCGGCGGGGACATGCGGTATCTACCAGGTTCATGACAATCTTCGGAGGCTGAACCCAGAAGCCTATACTCCTCACATAGTTTCTATTGGCCCTTTCCACCATGGCAAAATACCAAGTTGCATCCCCATGGAAAATCGCAAACGAAACCATTACTTCATTAACTTCAACCATCGTCTGCAGCAACGCGACAGACACGCTTTGGATCGCTACAAAGCCTTCCTTGACAACAAAAAGCAAGACATACGCAAAGCTTATAATTTACAGGAACAGCACGAGCATGAACTGGATAAGTTCGACAATAACGAGATTCTCTTCCTAGACATGGATGATGAAGACGATGTATTGAATACGCCATGGCGTCTTTTGAGCATCCAGCGAGACATGCTTCTGCTCGAAAATCAGCTTCCACTTTTTGTGTTGGAGGAATTACATCGTACTGTTGTGCTTCCCAACTGTATTCATCCTCAACATTCAATCTTGGACCTTGCCAGTGAATTCTTCCTTCATAATTTTCTAGATGCGGGATCTTCAGCTAGCAAAACGCAGGCGCAAGAAATGCGACAATTGAAACACTTGGCCGATTTTATTCGGTGTTTTTATATTCCAGATCGATGGTCGTCTGTACAAAAATTAGGCAATAAGTGTGAGTATTCAGGTGTGCTAAAGAGAGCAAAGAAGCTGAACAAGGCATGGGTTTGCTTCGAAGCAGACGATAGAGGTAAATGTTTACTTGACATAGAGTTCAAGAAGAGATTTTTATGGTCTAGACGGTTTCGATTCCCACAGCTGAAAATAGACGACACAACTGAAAGTGTTCTTCGGAACATCATTGCGTTTGAGCAGAATCACTTGGGCGGTGCGGGACAAGATTTCGTTTCCAACTACGTTGCTCGGCTTGATGATCTGATTGACGATAACGAAGACGCAGCTTTGCTTTTTGAGAAGCAAATTATTGTAAACACGCTGGGAAGCAACGAGTTTTTGTCGGTGTATGCGGGTGATACTCGGAGAGCTAGTATGTCCATCTTGGGAATTGTTGTCTTCATCTTCAGTACCACCAACACTGTCCGTAGTCCTGAATTAAAAGATATAATGTCTGAATTTCTGAAGTCCATGATCCTGGTACTATCAGTTCTTGTGTTGGAGTCACACTTTGTGGAAGAGAAAATACACGTGAGGATGACCAACATGTTAGATAATAATTTGGAGATGACTATTCATTGCAAATCTAAAAATGACGACCTCGGGGAGCATCATCTTCGTCATTTAGAACAATATGAGTTCAGTTTCAACCCAAATATTTGGGGGACAACTCTATATTATTGTAGCTTTCAATGGGAAGGAGCTTTCAAGTGGTTCGATATATACAACGATAAAAGGGATGCACTGAGAGGAGTTGCTAATGGAACCTCGGAAGAAGATAATAGGTTGCTGATGGCAGACATTTCGGAATTGAAAGTCAAGAAGGCAGTCTTTGAACTGGGGGGGGGGGGTTTGAAAGCAGCATGGATTTGGAGCAGTATTGACAAAGGGCGGACAATGTGA 1629 0.4316 MISCCMKMTSNQNDAENAYSDYNDGGQRPAGTCGIYQVHDNLRRLNPEAYTPHIVSIGPFHHGKIPSCIPMENRKRNHYFINFNHRLQQRDRHALDRYKAFLDNKKQDIRKAYNLQEQHEHELDKFDNNEILFLDMDDEDDVLNTPWRLLSIQRDMLLLENQLPLFVLEELHRTVVLPNCIHPQHSILDLASEFFLHNFLDAGSSASKTQAQEMRQLKHLADFIRCFYIPDRWSSVQKLGNKCEYSGVLKRAKKLNKAWVCFEADDRGKCLLDIEFKKRFLWSRRFRFPQLKIDDTTESVLRNIIAFEQNHLGGAGQDFVSNYVARLDDLIDDNEDAALLFEKQIIVNTLGSNEFLSVYAGDTRRASMSILGIVVFIFSTTNTVRSPELKDIMSEFLKSMILVLSVLVLESHFVEEKIHVRMTNMLDNNLEMTIHCKSKNDDLGEHHLRHLEQYEFSFNPNIWGTTLYYCSFQWEGAFKWFDIYNDKRDALRGVANGTSEEDNRLLMADISELKVKKAVFELGGGGLKAAWIWSSIDKGRTM 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0037 542 Pfam Plant self-incompatibility protein S1 419 490 IPR010264 -
Lele38g0037 542 Coils Coil 102 122 - -
Lele38g0037 542 PANTHER BNAC04G53230D PROTEIN 28 354 - -
Lele38g0037 542 Pfam Plant protein of unknown function 35 354 IPR004158 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0037 Lele-ChrLele38 232272 236187 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0037 411 489 Carbohydrate Esterase AT3G16970 40.506 2.42e-15 71.6