Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0035 ATGCCACAACTTCTTAAATCCATCATCCTCGTACTATCAGTTCTTGTGTTGGTTGAGGCCGACACGCGCGTGAGCATCAGCAACAATTTATACAACAATTTGGAGCTGAGTATTCATTGCCGATCTGGAGATGCAGATATGGGTGTGCAAGTAGTTCATCCTCAACAAAGTTACGATTTTCATTTCACGCCTAAAGAGAAGGGAACAACTCTCTTCTATTGTAGCTTTGATTGGGAAGGAGTTCAGAAATGGTTTGATGTATATGATAGTGCCAGGGATAAAAGCAATTGCATTGATGATTATTGCTTGTGGGTAATTTCGCAAGATCAACCATGTCAGTTTAATGCACCTGGTGGTAACGGCGTTCTTGTGTTGGTACCACACTGGGTCCAAGCCAAAACACATGTGAAGATCACAAACATGTTAGATAATAATTTGGACCTGATTCTTCATTGCAAATCAAAAGATGACGACCTCGGGGAGCATCTTCTTCATGAGTTAGAATCTTTTGAGTTCAATGGCAGAACGATCGTGAGGATCACCAACATGTTAGATGATAATTTGGACTTGACTATTCATTGTAAATCCAAAGATGACGATCTCGGGGAGCATGTTCTTCACCATTTAGAAGCTTTTGAGTTCGGTTTCAACACCAATATTTGGGGTACAACTCTATTCTATTGTAGCTTTCAATGGGAAGGAGGTTTTAAGCGGTTTGATATATACGATTATGGAAGGGATGGAACAGAATGTGTTACCAATCAGTGCAACTGGAAAATTAAGCCGAAAGAACCATGTATGAATGATGGTGATCATAAGGTTGAGCTATGTTATCCTTACAATTAA 846 0.3983 MPQLLKSIILVLSVLVLVEADTRVSISNNLYNNLELSIHCRSGDADMGVQVVHPQQSYDFHFTPKEKGTTLFYCSFDWEGVQKWFDVYDSARDKSNCIDDYCLWVISQDQPCQFNAPGGNGVLVLVPHWVQAKTHVKITNMLDNNLDLILHCKSKDDDLGEHLLHELESFEFNGRTIVRITNMLDDNLDLTIHCKSKDDDLGEHVLHHLEAFEFGFNTNIWGTTLFYCSFQWEGGFKRFDIYDYGRDGTECVTNQCNWKIKPKEPCMNDGDHKVELCYPYN 281
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0035 281 Pfam Plant self-incompatibility protein S1 178 279 IPR010264 -
Lele38g0035 281 Pfam Plant self-incompatibility protein S1 23 118 IPR010264 -
Lele38g0035 281 Pfam Plant self-incompatibility protein S1 135 173 IPR010264 -
Lele38g0035 281 PANTHER - 176 269 IPR010264 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0035 Lele-ChrLele38 222275 224836 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0035 173 281 Carbohydrate Esterase AT3G16970 39.286 6.49e-19 79.3