Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0034 ATGGCAACCGATATGCAGAAGCTAACTGGGACAAGTGAAGATGATGAGGATGATATGGGAATGGATGTGAAAGAAGAGGATGATGAGGATGAAGAGAATGTAGGTAATCATGGTGATGCTCCAGTGCTGGTAGATGTTGATGGTGGGATGGGAACTGTTAGGTATAACAACAGTTTTCAACAGCACCAGCAATTTCAAGAACAAACAAGCACTCCAGGTGGAGGGACTCGAAGGTGTAGGCCTCTAGAAGAGAAAGAGAGAACAAAGCTAAGAGAGAGGCATCGTAGGGCTATAACTGCGAGGATTTTGGCTGGGCTTCGAAGGCATGGCAACTATAATCTTAGAGTTAGAGCTGACATAAATGATGTCATTGCTGCTCTGGCAAGGGAAGCTGGATGGGTAGTTCTTCCAGATGGCACTATTTTTCCTTCAAGATCTCAGGGCCAGAGACCAGCTGGCGGTACTTCTACTGTGGTGACTTCATCAGGTTCCCATATGGCTTCACAACAGGCTTCACCTACTTCCCTCAAGGGAGCCACTTCAGGTTATAGGAGCTCTTCAGAGTATAATGCAAGTCGATTGGAAGGTGTTTTTACGCCTGCTCCAACAGCTCACGATCTAACCTCAGGTTCCCAGTCTCAATCATCATCCATGATGGGGAGTGGAGAAGAACAGAGAGACAACCATCGTCTCATTGGCTGTTCAGTGGATCATGTTGATGAGAAGCAGATTGTGGACATGCGCCACAGATTTACTGAGCGTGATTTTGCTGGTACCCCGTATGTTCCAGTTTATGTGATGCTACCGCTGAGGGTGTTGAAATCATTGCATGTTGATGGTGTTATGGTAGACTGCTGGTGGGGAATAGTGGAGGCACATGCTCCTCTGGAGTATAATTGGAATGGTTACAAGAAACTTTTTCAGATGGTGCGTGAACTTAAGCTTAAGTTGCAGGTTGTGATGTCATTTCATGAATGTGGAGGCAATTTTGGTGACGATGTTTGTATTCCAATACCCCATTGGGTTGCTGAAATTGGTAGGAGCAATCCTGACATTTTTTTCACTGATAGAGAGGGAAGGCACAACCCTGAATGTCTTTCTTGGGGAATAGATAAGGAACGGATTTTAAGAGGTCGGACTGCTTTAGAGGTTTATTTTGACTTCATGAGAAGCTTCAGGGTAGAGTTTGATGAGTATTTTGAGGATGGTATAATCTCTATGATTGAAGTTGGACTCGGTCCACGTGGGGAGCTAAGATACCCATCTTGCCCTGTAAAGCATGGTTGGAGATATCCTGGTATTGGGGAATTCCAGTGCTATGATCAATATTTGTTAAAAGGTCTTAGGAAGGAAGCAGAAACAAGGGGACACCCCACGTGGGCTAGAGGACCAGATAATGCTGGTACCTATAATTCACAACCAAACGACACAAGTTTCTTTTGCGATGGAGGAGATTATGATGGTTACTATGGCAGGTTTTTTCTTAGCTGGTACTCTCAGGTTTTGGTTGATCATGGAAACTGTGTACTTTCTCTGGCAAAATTAGCTTTTGAGGGAACCTGCATTGCTGCAAAGAACGATGGAAGGTATTTAATTTGGTGTGTCTTGATACAGTCTGTTTGCTATATTTTAATTTCTAAACAGCTATCAGGTATTCACTGGTGGTACAAGACTGTAAGTCATGCGGCTGAATTAACTGCTGGGTTTTATAACCCGTGCAATCGTGATGGTTATGTTGCAATCATGACAATGCTAAAGAAGAATGGAGCAAGTTTAAACTTAGCTTGCGCTGACCTGCACTCATTGAATCAGCATGAGGACTTTCCAGGAGCGTTTTCAGATCCTGAGGGATTAGTCTGGCAGGTGTTGAATGCAGCTTGGGATATTTGCCTCCCAGTTTCAAGTGAGAATGCACTTCCTTGCCTAAATAGAGCTGGCTATAATAAGATTTTGGATAATGCCAAGCCCATGAATGAACCAGATGGAAAACATTTTACATCGTTTACTTACCTGAGACTAAGTCCACTTCTTATGGAAAGACAAAACTTCTTAGAGTTTGAACGATTTGTCAAGAGAATGCATGGGGAAGCCGTTCTTGATCTCCAGGCATAG 2112 0.4375 MATDMQKLTGTSEDDEDDMGMDVKEEDDEDEENVGNHGDAPVLVDVDGGMGTVRYNNSFQQHQQFQEQTSTPGGGTRRCRPLEEKERTKLRERHRRAITARILAGLRRHGNYNLRVRADINDVIAALAREAGWVVLPDGTIFPSRSQGQRPAGGTSTVVTSSGSHMASQQASPTSLKGATSGYRSSSEYNASRLEGVFTPAPTAHDLTSGSQSQSSSMMGSGEEQRDNHRLIGCSVDHVDEKQIVDMRHRFTERDFAGTPYVPVYVMLPLRVLKSLHVDGVMVDCWWGIVEAHAPLEYNWNGYKKLFQMVRELKLKLQVVMSFHECGGNFGDDVCIPIPHWVAEIGRSNPDIFFTDREGRHNPECLSWGIDKERILRGRTALEVYFDFMRSFRVEFDEYFEDGIISMIEVGLGPRGELRYPSCPVKHGWRYPGIGEFQCYDQYLLKGLRKEAETRGHPTWARGPDNAGTYNSQPNDTSFFCDGGDYDGYYGRFFLSWYSQVLVDHGNCVLSLAKLAFEGTCIAAKNDGRYLIWCVLIQSVCYILISKQLSGIHWWYKTVSHAAELTAGFYNPCNRDGYVAIMTMLKKNGASLNLACADLHSLNQHEDFPGAFSDPEGLVWQVLNAAWDICLPVSSENALPCLNRAGYNKILDNAKPMNEPDGKHFTSFTYLRLSPLLMERQNFLEFERFVKRMHGEAVLDLQA 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0034 703 MobiDBLite consensus disorder prediction 63 91 - -
Lele38g0034 703 MobiDBLite consensus disorder prediction 204 222 - -
Lele38g0034 703 MobiDBLite consensus disorder prediction 200 226 - -
Lele38g0034 703 MobiDBLite consensus disorder prediction 142 184 - -
Lele38g0034 703 PANTHER BETA-AMYLASE 1, CHLOROPLASTIC 209 696 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 SUPERFAMILY (Trans)glycosidases 256 698 IPR017853 -
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 618 640 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 578 601 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 298 316 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 277 291 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 543 559 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 560 571 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Beta-amylase (glycosyl hydrolase family 14) signature 320 341 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 MobiDBLite consensus disorder prediction 1 51 - -
Lele38g0034 703 Gene3D Glycosidases 252 702 - -
Lele38g0034 703 MobiDBLite consensus disorder prediction 15 34 - -
Lele38g0034 703 Pfam Glycosyl hydrolase family 14 270 688 IPR001554 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Plant beta-amylase signature 669 683 IPR001371 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Plant beta-amylase signature 684 698 IPR001371 GO:0000272|GO:0016161
Lele38g0034 703 PRINTS Plant beta-amylase signature 403 412 IPR001371 GO:0000272|GO:0016161
Lele38g0034 703 Pfam BES1/BZR1 plant transcription factor, N-terminal 75 210 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0034 Lele-ChrLele38 216351 221286 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0034 1 700 Glycoside Hydrolase AT2G45880 62.050 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele38g0034 Glyco_hydro_14 3.3e-92 CL0058