Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0028 ATGGGAATTCAGTGCTCCACACTCATTCCATGTTGTGTGAATTCACAAGTGAAGGCATCTGCTCTTGAACCTTTTGATGCTGTTAATGAGGATACAAGCGAGACCAATGACTCGCCTGCATTCCATGAGTATACATTTGAGCAGCTTAAGAATGCAACATCTGGTTTTGCTGTGGAGAATATTGTATCTGAACATGGGGAGAAGGCTCCGAATGTTGTTTATAAAGGGAAGCTGGAGAATCAAATGAGAATTGCTTTTAAGCGGTTCAATAGAAATGCTTGGCCTGATGTCCGGCAATTTTTGGATTGTAATCCTAGGCTTTCAAGTTTTGGCCTTATGAAGAATAGTAGGGATGGGAAAAGTTATAGCACTAATCTGGCCTTTACCCCACCAGAGTATCTGAGAACTGGTGCGGAACACTTCTGGAGAGTAACATCAGAAAGTGTAATTTATAGCTTTGGTACTCTTTTGCTTGATCTTCTCAGCGGGAAGCATATCCCCCCAAGCCATGCCCTTGACTTGATTCGGAATAGAAATCTTCAGATGCTGGCAGACTCTTGTTTGGAAGGACAGTTTTCTGATGACGATGGAACCGAGTTGGCACGCCTGGTATCTCGATGTTTACAGTATGAACCTAGAGAACGGCCAAATCCCAAGTCATTGGTGGCTGCATTGGCACCGCTTCAGAAAGAAACGGAGGTTCCTTCACATGTCTTGATGGGTGTTCCACACAGCGCTACGTTCGCTTCATTGTCCCCACTTGGTGAAGCATGCTCAAGAAAAGACTTGACTGCTAAACAAGAAGTTCTGGAAAATATTGGCTATAAAGATGATGGAGTGACAAACGAGTTATCATTCCATATGTGGACTGATCAAATGCAGGACACGCTAAATTGTAAGAAAAAGGGGGATGTTGCTTTCCGACAGAAAGATTTTCGACTTGCTATTGAGTGTTACACACAGCGCAGTTTATGTTATCTCATGAGTGACATGCCTCAAGAAGCTTTGAATGATGCAATGCAAGCACAAATTATCTCTGCCGTATGGCACATTGCATCATATCTTCAATCGGTGGCTCTCGCCAAGATCGGGATGGAGAATGAAGCTCAAGTGGCACTTGAAGGCGGCACAGCACAGGAAGCCAAGAGAAATGCAGGTGGTGGACCAAAGTAA 1173 0.4408 MGIQCSTLIPCCVNSQVKASALEPFDAVNEDTSETNDSPAFHEYTFEQLKNATSGFAVENIVSEHGEKAPNVVYKGKLENQMRIAFKRFNRNAWPDVRQFLDCNPRLSSFGLMKNSRDGKSYSTNLAFTPPEYLRTGAEHFWRVTSESVIYSFGTLLLDLLSGKHIPPSHALDLIRNRNLQMLADSCLEGQFSDDDGTELARLVSRCLQYEPRERPNPKSLVAALAPLQKETEVPSHVLMGVPHSATFASLSPLGEACSRKDLTAKQEVLENIGYKDDGVTNELSFHMWTDQMQDTLNCKKKGDVAFRQKDFRLAIECYTQRSLCYLMSDMPQEALNDAMQAQIISAVWHIASYLQSVALAKIGMENEAQVALEGGTAQEAKRNAGGGPK 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0028 390 Gene3D Phosphorylase Kinase; domain 1 29 104 - -
Lele38g0028 390 PANTHER SERINE/THREONINE-PROTEIN KINASE BSK5 102 384 IPR045845 GO:0004672|GO:0009742
Lele38g0028 390 SUPERFAMILY Protein kinase-like (PK-like) 102 236 IPR011009 -
Lele38g0028 390 Pfam Protein tyrosine and serine/threonine kinase 106 224 IPR001245 GO:0004672|GO:0006468
Lele38g0028 390 SUPERFAMILY TPR-like 297 374 IPR011990 GO:0005515
Lele38g0028 390 Gene3D Transferase(Phosphotransferase) domain 1 105 240 - -
Lele38g0028 390 ProSiteProfiles Protein kinase domain profile. 1 240 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0028 Lele-ChrLele38 189935 194247 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0028 104 230 Receptor kinase-like Gene Family AT3G58690 31.034 9.92e-11 61.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XII-1 Lele38g0028 PK_Tyr_Ser-Thr 2.4e-06 CL0016