Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele38g0026 ATGGATCGAGGGGACCATATGGCGTTATCTGGGTCCGCATCTTACTATATGCAGAGAGGGCTAGGTGGTGGTGGAGCACAAGCTGAGTTACATGGTTCTCCTGGTATTCGGCACCTCTCGAATCCCAATCTGCCATTTCAACCTGGCATTGGAGGCGGCGGCGGCGGCATTGGATCCACATTAGCAGTAGAATCTTCAGCAATTTCACCTCATGGTGTGAATGTGGGTGCTCCTGGTGCACCGCCGGGAGAGCCCGTCAAAAGAAAGAGAGGAAGGCCTAGGAAATATGGTCCAGATGGAAGTGTATCATTGGCCTTGACTCCATCATCATCCGGTCATCCCAGAGCATTGACACAAAGCCAGAAGCGAGGCAGAGGCCGTCCTCCGGGATCTGGAAAGAAACAGCAGTTAACCCCTCTTGGCGAATTGATGTCTGGTTCGGCAGGGATGGGATTTACTCCTCATATCATCACCATTGCAGTTGGAGAGGACATTGCAACAAAAATAATGGCATTTTCTCAGCAAGGACCTAGAGCCATATGCATTTTGTCAGCGAACGGTGCTGTCTCCAATGTGACGCTTAGACAGCCTTCAAGTTCGGGTGGCACTGTCACATACGAGGGCCGTTTCGAGATATTGTGCCTATCGGGCTCTTATTTGCTCACTGAAAGTGGTGGCTCTCGCAATCGAACTGGCAGTCTTAGTGTTTCGCTAGCTAGTCCCGATGGCCGTGTCATTGGTGGTGGGGTCGGTGGACTGCTGATTGCAGCAAGTCCTGTTCAGGTGATAGTTGGGAGCTTCATGTGCGGTGGATCAAAGACAAAGAGCAAGAAAAAGGAAGCTGCAGAAGAAGCAGAAGTAGCCATGGAATCAGATCATCATCATCATCATCAACAACAACAACAGCAACACTCGGTTCATAATCCATCTGCATTGAACAGCATTTCACCTAATCAAAATCTCACGCAAGCTTCATCCATGAGTTCCTGGCCGGCTGCTTCTCGTCAATTGGACATGCGTAATTCCCATGTTGACATCGATTTAATGCGTGGGTGA 1056 0.4991 MDRGDHMALSGSASYYMQRGLGGGGAQAELHGSPGIRHLSNPNLPFQPGIGGGGGGIGSTLAVESSAISPHGVNVGAPGAPPGEPVKRKRGRPRKYGPDGSVSLALTPSSSGHPRALTQSQKRGRGRPPGSGKKQQLTPLGELMSGSAGMGFTPHIITIAVGEDIATKIMAFSQQGPRAICILSANGAVSNVTLRQPSSSGGTVTYEGRFEILCLSGSYLLTESGGSRNRTGSLSVSLASPDGRVIGGGVGGLLIAASPVQVIVGSFMCGGSKTKSKKKEAAEEAEVAMESDHHHHHQQQQQQHSVHNPSALNSISPNQNLTQASSMSSWPAASRQLDMRNSHVDIDLMRG 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele38g0026 351 ProSiteProfiles PPC domain profile profile. 148 288 IPR005175 -
Lele38g0026 351 CDD DUF296 153 267 IPR005175 -
Lele38g0026 351 MobiDBLite consensus disorder prediction 103 118 - -
Lele38g0026 351 MobiDBLite consensus disorder prediction 272 336 - -
Lele38g0026 351 MobiDBLite consensus disorder prediction 24 143 - -
Lele38g0026 351 SUPERFAMILY AF0104/ALDC/Ptd012-like 152 268 - -
Lele38g0026 351 SMART AT_hook_2 122 134 IPR017956 GO:0003677
Lele38g0026 351 SMART AT_hook_2 87 99 IPR017956 GO:0003677
Lele38g0026 351 Pfam Plants and Prokaryotes Conserved (PCC) domain 154 267 IPR005175 -
Lele38g0026 351 Gene3D - 154 297 - -
Lele38g0026 351 FunFam AT-hook motif nuclear-localized protein 1-like 154 285 - -
Lele38g0026 351 MobiDBLite consensus disorder prediction 273 299 - -
Lele38g0026 351 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 73 320 IPR039605 GO:0003680
Lele38g0026 351 MobiDBLite consensus disorder prediction 302 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele38g0026 Lele-ChrLele38 173268 177206 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele38g0026 1 351 AT-hook Motif Nuclear Localized (AHL) Family AT3G61310 51.366 3.93e-91 275